Gene : Glyma.07G102100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23111//PTHR23111:SF40 - ZINC FINGER PROTEIN Genomic Order:  1021
Name:  ? Glyma.07G102100 Secondary Identifier:  ? PAC:30491837
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G102100 0.5kb upstream 0.5kb upstream 6014 true Chr07: 9728404-9734417 Glycine max
Glyma.07G102100 0.5kb upstream 0.5kb upstream 500 false Chr07: 9733918-9734417 Glycine max
Glyma.07G102100 0.5kb downstream 0.5kb downstream 6014 true Chr07: 9727904-9733917 Glycine max
Glyma.07G102100 0.5kb downstream 0.5kb downstream 500 false Chr07: 9727904-9728403 Glycine max
Glyma.07G102100 1.0kb upstream 1.0kb upstream 6514 true Chr07: 9728404-9734917 Glycine max
Glyma.07G102100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9733918-9734917 Glycine max
Glyma.07G102100 1.0kb downstream 1.0kb downstream 6514 true Chr07: 9727404-9733917 Glycine max
Glyma.07G102100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9727404-9728403 Glycine max
Glyma.07G102100 2.0kb upstream 2.0kb upstream 7514 true Chr07: 9728404-9735917 Glycine max
Glyma.07G102100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9733918-9735917 Glycine max
Glyma.07G102100 2.0kb downstream 2.0kb downstream 7514 true Chr07: 9726404-9733917 Glycine max
Glyma.07G102100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9726404-9728403 Glycine max
Glyma.07G102100 5.0kb upstream 5.0kb upstream 10514 true Chr07: 9728404-9738917 Glycine max
Glyma.07G102100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9733918-9738917 Glycine max
Glyma.07G102100 5.0kb downstream 5.0kb downstream 10514 true Chr07: 9723404-9733917 Glycine max
Glyma.07G102100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9723404-9728403 Glycine max
Glyma.07G102100 10.0kb upstream 10.0kb upstream 15514 true Chr07: 9728404-9743917 Glycine max
Glyma.07G102100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9733918-9743917 Glycine max
Glyma.07G102100 10.0kb downstream 10.0kb downstream 15514 true Chr07: 9718404-9733917 Glycine max
Glyma.07G102100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9718404-9728403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303032 5265 Fabidae View MSA
124068006 5270 Rosid View MSA
123752037 5271 Pentapetalae View MSA
122793465 5272 Eudicot View MSA
122045549 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.92667 0.0 29.6731    
cufflinks 9.19509 0.0 33.9848    
cufflinks 5.49131 0.0 23.3001    
cufflinks 9.54986 0.0 29.9753    
cufflinks 7.35803 0.0 24.1631    
cufflinks 1.52042 0.0 5.95893   Low
cufflinks 9.16662 0.0 29.0144    
cufflinks 6.58366 0.0 22.1148    
cufflinks 5.72819 0.0 19.9773    
cufflinks 0.559        
cufflinks 0.143       Low
cufflinks 1.269        
cufflinks 0.873        
cufflinks 1.147        
cufflinks 0.268       Low
cufflinks 1.604        
cufflinks 0.387        
cufflinks 1.101        
cufflinks 1.79       High
cufflinks 1.296        
cufflinks 0.177       Low
cufflinks 1.374        
cufflinks 1.84       High
cufflinks 0.137       Low
cufflinks 1.47        
cufflinks 0.445        

0 Strain