Gene : Glyma.07G056700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23092:SF19 - NUCLEOTIDYLTRANSFERASE Genomic Order:  567
Name:  ? Glyma.07G056700 Secondary Identifier:  ? PAC:30493320
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G056700 0.5kb upstream 0.5kb upstream 9153 true Chr07: 5026549-5035701 Glycine max
Glyma.07G056700 0.5kb upstream 0.5kb upstream 500 false Chr07: 5035202-5035701 Glycine max
Glyma.07G056700 0.5kb downstream 0.5kb downstream 9153 true Chr07: 5026049-5035201 Glycine max
Glyma.07G056700 0.5kb downstream 0.5kb downstream 500 false Chr07: 5026049-5026548 Glycine max
Glyma.07G056700 1.0kb upstream 1.0kb upstream 9653 true Chr07: 5026549-5036201 Glycine max
Glyma.07G056700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5035202-5036201 Glycine max
Glyma.07G056700 1.0kb downstream 1.0kb downstream 9653 true Chr07: 5025549-5035201 Glycine max
Glyma.07G056700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5025549-5026548 Glycine max
Glyma.07G056700 2.0kb upstream 2.0kb upstream 10653 true Chr07: 5026549-5037201 Glycine max
Glyma.07G056700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5035202-5037201 Glycine max
Glyma.07G056700 2.0kb downstream 2.0kb downstream 10653 true Chr07: 5024549-5035201 Glycine max
Glyma.07G056700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5024549-5026548 Glycine max
Glyma.07G056700 5.0kb upstream 5.0kb upstream 13653 true Chr07: 5026549-5040201 Glycine max
Glyma.07G056700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5035202-5040201 Glycine max
Glyma.07G056700 5.0kb downstream 5.0kb downstream 13653 true Chr07: 5021549-5035201 Glycine max
Glyma.07G056700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5021549-5026548 Glycine max
Glyma.07G056700 10.0kb upstream 10.0kb upstream 18653 true Chr07: 5026549-5045201 Glycine max
Glyma.07G056700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5035202-5045201 Glycine max
Glyma.07G056700 10.0kb downstream 10.0kb downstream 18653 true Chr07: 5016549-5035201 Glycine max
Glyma.07G056700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5016549-5026548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301621 5265 Fabidae View MSA
124073820 5270 Rosid View MSA
123748452 5271 Pentapetalae View MSA
122797463 5272 Eudicot View MSA
122048023 5273 Angiosperm View MSA
121349177 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.1764 0.0 35.2799    
cufflinks 6.81774 0.0 27.3281    
cufflinks 9.95993 0.0 40.7859   High
cufflinks 8.22752 0.0 33.2525    
cufflinks 6.90517 0.0 29.8984    
cufflinks 4.38078 0.0 15.1353   Low
cufflinks 10.9449 0.0 45.5138   High
cufflinks 6.00133 0.0 24.2865    
cufflinks 6.50678 0.0 26.1939    
cufflinks 1.056       Low
cufflinks 1.381        
cufflinks 1.957        
cufflinks 1.459        
cufflinks 1.684        
cufflinks 1.252        
cufflinks 1.81        
cufflinks 0.934       Low
cufflinks 1.888        
cufflinks 2.168       High
cufflinks 1.847        
cufflinks 1.22        
cufflinks 1.948        
cufflinks 1.893        
cufflinks 1.519        
cufflinks 1.743        
cufflinks 1.253        

0 Strain