Gene : Glyma.07G049400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR26402//PTHR26402:SF560 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  494
Name:  ? Glyma.07G049400 Secondary Identifier:  ? PAC:30492988
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G049400 0.5kb upstream 0.5kb upstream 5307 true Chr07: 4201368-4206674 Glycine max
Glyma.07G049400 0.5kb upstream 0.5kb upstream 500 false Chr07: 4206175-4206674 Glycine max
Glyma.07G049400 0.5kb downstream 0.5kb downstream 5307 true Chr07: 4200868-4206174 Glycine max
Glyma.07G049400 0.5kb downstream 0.5kb downstream 500 false Chr07: 4200868-4201367 Glycine max
Glyma.07G049400 1.0kb upstream 1.0kb upstream 5807 true Chr07: 4201368-4207174 Glycine max
Glyma.07G049400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 4206175-4207174 Glycine max
Glyma.07G049400 1.0kb downstream 1.0kb downstream 5807 true Chr07: 4200368-4206174 Glycine max
Glyma.07G049400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 4200368-4201367 Glycine max
Glyma.07G049400 2.0kb upstream 2.0kb upstream 6807 true Chr07: 4201368-4208174 Glycine max
Glyma.07G049400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 4206175-4208174 Glycine max
Glyma.07G049400 2.0kb downstream 2.0kb downstream 6807 true Chr07: 4199368-4206174 Glycine max
Glyma.07G049400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 4199368-4201367 Glycine max
Glyma.07G049400 5.0kb upstream 5.0kb upstream 9807 true Chr07: 4201368-4211174 Glycine max
Glyma.07G049400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 4206175-4211174 Glycine max
Glyma.07G049400 5.0kb downstream 5.0kb downstream 9807 true Chr07: 4196368-4206174 Glycine max
Glyma.07G049400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 4196368-4201367 Glycine max
Glyma.07G049400 10.0kb upstream 10.0kb upstream 14807 true Chr07: 4201368-4216174 Glycine max
Glyma.07G049400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 4206175-4216174 Glycine max
Glyma.07G049400 10.0kb downstream 10.0kb downstream 14807 true Chr07: 4191368-4206174 Glycine max
Glyma.07G049400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 4191368-4201367 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250189 5265 Fabidae View MSA
123993470 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.689 0.0 282.803 High  
cufflinks 58.3037 0.0 434.687 High  
cufflinks 67.3983 0.0 483.936 High  
cufflinks 64.7521 0.0 478.58 High  
cufflinks 10.1795 0.0 44.5433   Low
cufflinks 11.0917 0.0 51.7083   Low
cufflinks 47.8577 0.0 309.468 High  
cufflinks 56.521 0.0 368.285 High  
cufflinks 14.2758 0.0 71.8467   Low
cufflinks 1.293        
cufflinks 0.26       Low
cufflinks 2.7        
cufflinks 0.495        
cufflinks 0.305       Low
cufflinks 1.07        
cufflinks 2.74        
cufflinks 0.34       Low
cufflinks 2.078        
cufflinks 1.812        
cufflinks 2.671        
cufflinks 0.342       Low
cufflinks 3.309       High
cufflinks 3.057       High
cufflinks 0.304       Low
cufflinks 3.451       High
cufflinks 0.573        

0 Strain