Gene : Glyma.07G028300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Genomic Order:  283
Name:  ? Glyma.07G028300 Secondary Identifier:  ? PAC:30491973
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G028300 0.5kb upstream 0.5kb upstream 9945 true Chr07: 2268355-2278299 Glycine max
Glyma.07G028300 0.5kb upstream 0.5kb upstream 500 false Chr07: 2277800-2278299 Glycine max
Glyma.07G028300 0.5kb downstream 0.5kb downstream 9945 true Chr07: 2267855-2277799 Glycine max
Glyma.07G028300 0.5kb downstream 0.5kb downstream 500 false Chr07: 2267855-2268354 Glycine max
Glyma.07G028300 1.0kb upstream 1.0kb upstream 10445 true Chr07: 2268355-2278799 Glycine max
Glyma.07G028300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2277800-2278799 Glycine max
Glyma.07G028300 1.0kb downstream 1.0kb downstream 10445 true Chr07: 2267355-2277799 Glycine max
Glyma.07G028300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2267355-2268354 Glycine max
Glyma.07G028300 2.0kb upstream 2.0kb upstream 11445 true Chr07: 2268355-2279799 Glycine max
Glyma.07G028300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2277800-2279799 Glycine max
Glyma.07G028300 2.0kb downstream 2.0kb downstream 11445 true Chr07: 2266355-2277799 Glycine max
Glyma.07G028300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2266355-2268354 Glycine max
Glyma.07G028300 5.0kb upstream 5.0kb upstream 14445 true Chr07: 2268355-2282799 Glycine max
Glyma.07G028300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2277800-2282799 Glycine max
Glyma.07G028300 5.0kb downstream 5.0kb downstream 14445 true Chr07: 2263355-2277799 Glycine max
Glyma.07G028300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2263355-2268354 Glycine max
Glyma.07G028300 10.0kb upstream 10.0kb upstream 19445 true Chr07: 2268355-2287799 Glycine max
Glyma.07G028300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2277800-2287799 Glycine max
Glyma.07G028300 10.0kb downstream 10.0kb downstream 19445 true Chr07: 2258355-2277799 Glycine max
Glyma.07G028300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2258355-2268354 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306854 5265 Fabidae View MSA
124070907 5270 Rosid View MSA
123740831 5271 Pentapetalae View MSA
122787198 5272 Eudicot View MSA
122042006 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121344992 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9511 0.0 42.7949    
cufflinks 11.8898 0.0 46.4316    
cufflinks 78.6546 0.0 469.849 High High
cufflinks 13.3759 0.0 51.4551    
cufflinks 11.2161 0.0 43.2096    
cufflinks 27.898 0.0 101.503 High  
cufflinks 9.91509 0.0 38.8371    
cufflinks 20.76 0.0 82.3783    
cufflinks 18.9325 0.0 74.3124    
cufflinks 0.632        
cufflinks 0.977        
cufflinks 2.563       High
cufflinks 0.447       Low
cufflinks 0.233       Low
cufflinks 1.094        
cufflinks 1.176        
cufflinks 1.048        
cufflinks 0.98        
cufflinks 0.884        
cufflinks 1.773       High
cufflinks 0.985        
cufflinks 1.4        
cufflinks 0.554        
cufflinks 0.985        
cufflinks 1.568        
cufflinks 1.333        

0 Strain