Gene : Glyma.07G025700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12281:SF12 - DEFECTIVE IN CULLIN NEDDYLATION PROTEIN Genomic Order:  257
Name:  ? Glyma.07G025700 Secondary Identifier:  ? PAC:30491788
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G025700 0.5kb upstream 0.5kb upstream 5254 true Chr07: 2006893-2012146 Glycine max
Glyma.07G025700 0.5kb upstream 0.5kb upstream 500 false Chr07: 2011647-2012146 Glycine max
Glyma.07G025700 0.5kb downstream 0.5kb downstream 5254 true Chr07: 2006393-2011646 Glycine max
Glyma.07G025700 0.5kb downstream 0.5kb downstream 500 false Chr07: 2006393-2006892 Glycine max
Glyma.07G025700 1.0kb upstream 1.0kb upstream 5754 true Chr07: 2006893-2012646 Glycine max
Glyma.07G025700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2011647-2012646 Glycine max
Glyma.07G025700 1.0kb downstream 1.0kb downstream 5754 true Chr07: 2005893-2011646 Glycine max
Glyma.07G025700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2005893-2006892 Glycine max
Glyma.07G025700 2.0kb upstream 2.0kb upstream 6754 true Chr07: 2006893-2013646 Glycine max
Glyma.07G025700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2011647-2013646 Glycine max
Glyma.07G025700 2.0kb downstream 2.0kb downstream 6754 true Chr07: 2004893-2011646 Glycine max
Glyma.07G025700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2004893-2006892 Glycine max
Glyma.07G025700 5.0kb upstream 5.0kb upstream 9754 true Chr07: 2006893-2016646 Glycine max
Glyma.07G025700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2011647-2016646 Glycine max
Glyma.07G025700 5.0kb downstream 5.0kb downstream 9754 true Chr07: 2001893-2011646 Glycine max
Glyma.07G025700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2001893-2006892 Glycine max
Glyma.07G025700 10.0kb upstream 10.0kb upstream 14754 true Chr07: 2006893-2021646 Glycine max
Glyma.07G025700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2011647-2021646 Glycine max
Glyma.07G025700 10.0kb downstream 10.0kb downstream 14754 true Chr07: 1996893-2011646 Glycine max
Glyma.07G025700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1996893-2006892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305959 5265 Fabidae View MSA
124065495 5270 Rosid View MSA
123750395 5271 Pentapetalae View MSA
122789692 5272 Eudicot View MSA
122044903 5273 Angiosperm View MSA
121350604 5274 Embryophyte View MSA
123423915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.274 0.0 54.7848    
cufflinks 4.27813 0.0 17.5875   Low
cufflinks 14.4617 0.0 47.3078    
cufflinks 9.24848 0.0 32.5739    
cufflinks 11.8881 0.0 40.292    
cufflinks 21.0922 0.0 67.3891   High
cufflinks 11.4097 0.0 38.58    
cufflinks 12.5785 0.0 41.755    
cufflinks 12.8817 0.0 40.0985    
cufflinks 2.036        
cufflinks 4.269       High
cufflinks 1.769        
cufflinks 2.244        
cufflinks 2.053        
cufflinks 2.859        
cufflinks 1.545        
cufflinks 3.399       High
cufflinks 1.543        
cufflinks 0.978       Low
cufflinks 1.839        
cufflinks 3.147        
cufflinks 1.633        
cufflinks 1.386       Low
cufflinks 4.813       High
cufflinks 1.592        
cufflinks 3.301        

0 Strain