Gene : Glyma.06G302100 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  3021
Name:  ? Glyma.06G302100 Secondary Identifier:  ? PAC:30553259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G302100 0.5kb upstream 0.5kb upstream 4430 true Chr06: 49109796-49114225 Glycine max
Glyma.06G302100 0.5kb upstream 0.5kb upstream 500 false Chr06: 49109796-49110295 Glycine max
Glyma.06G302100 0.5kb downstream 0.5kb downstream 4430 true Chr06: 49110296-49114725 Glycine max
Glyma.06G302100 0.5kb downstream 0.5kb downstream 500 false Chr06: 49114226-49114725 Glycine max
Glyma.06G302100 1.0kb upstream 1.0kb upstream 4930 true Chr06: 49109296-49114225 Glycine max
Glyma.06G302100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49109296-49110295 Glycine max
Glyma.06G302100 1.0kb downstream 1.0kb downstream 4930 true Chr06: 49110296-49115225 Glycine max
Glyma.06G302100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49114226-49115225 Glycine max
Glyma.06G302100 2.0kb upstream 2.0kb upstream 5930 true Chr06: 49108296-49114225 Glycine max
Glyma.06G302100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49108296-49110295 Glycine max
Glyma.06G302100 2.0kb downstream 2.0kb downstream 5930 true Chr06: 49110296-49116225 Glycine max
Glyma.06G302100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49114226-49116225 Glycine max
Glyma.06G302100 5.0kb upstream 5.0kb upstream 8930 true Chr06: 49105296-49114225 Glycine max
Glyma.06G302100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49105296-49110295 Glycine max
Glyma.06G302100 5.0kb downstream 5.0kb downstream 8930 true Chr06: 49110296-49119225 Glycine max
Glyma.06G302100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49114226-49119225 Glycine max
Glyma.06G302100 10.0kb upstream 10.0kb upstream 13930 true Chr06: 49100296-49114225 Glycine max
Glyma.06G302100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49100296-49110295 Glycine max
Glyma.06G302100 10.0kb downstream 10.0kb downstream 13930 true Chr06: 49110296-49124225 Glycine max
Glyma.06G302100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49114226-49124225 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304911 5265 Fabidae View MSA
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.36104 0.0 23.2225   High
cufflinks 7.15552 0.0 26.3428   High
cufflinks 2.0168 0.0 6.82991    
cufflinks 3.43392 0.0 13.3698    
cufflinks 1.66237 0.0 6.06379    
cufflinks 1.87077 0.0 8.96458    
cufflinks 8.37208 0.0 30.6063   High
cufflinks 0.859534 0.0 5.17579   Low
cufflinks 1.60324 0.0 5.97468    
cufflinks 0.389        
cufflinks 0.119       Low
cufflinks 1.449        
cufflinks 1.251        
cufflinks 0.521        
cufflinks 0.063       Low
cufflinks 2.358        
cufflinks 0.166        
cufflinks 1.628        
cufflinks 2.584        
cufflinks 2.452        
cufflinks 0.066       Low
cufflinks 3.313       High
cufflinks 3.257       High
cufflinks 0.112       Low
cufflinks 2.462        
cufflinks 0.193        

0 Strain