Gene : Glyma.06G278700 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2787
Name:  ? Glyma.06G278700 Secondary Identifier:  ? PAC:30552513
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G278700 0.5kb upstream 0.5kb upstream 752 true Chr06: 46995758-46996509 Glycine max
Glyma.06G278700 0.5kb upstream 0.5kb upstream 500 false Chr06: 46996010-46996509 Glycine max
Glyma.06G278700 0.5kb downstream 0.5kb downstream 752 true Chr06: 46995258-46996009 Glycine max
Glyma.06G278700 0.5kb downstream 0.5kb downstream 500 false Chr06: 46995258-46995757 Glycine max
Glyma.06G278700 1.0kb upstream 1.0kb upstream 1252 true Chr06: 46995758-46997009 Glycine max
Glyma.06G278700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46996010-46997009 Glycine max
Glyma.06G278700 1.0kb downstream 1.0kb downstream 1252 true Chr06: 46994758-46996009 Glycine max
Glyma.06G278700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46994758-46995757 Glycine max
Glyma.06G278700 2.0kb upstream 2.0kb upstream 2252 true Chr06: 46995758-46998009 Glycine max
Glyma.06G278700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46996010-46998009 Glycine max
Glyma.06G278700 2.0kb downstream 2.0kb downstream 2252 true Chr06: 46993758-46996009 Glycine max
Glyma.06G278700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46993758-46995757 Glycine max
Glyma.06G278700 5.0kb upstream 5.0kb upstream 5252 true Chr06: 46995758-47001009 Glycine max
Glyma.06G278700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46996010-47001009 Glycine max
Glyma.06G278700 5.0kb downstream 5.0kb downstream 5252 true Chr06: 46990758-46996009 Glycine max
Glyma.06G278700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46990758-46995757 Glycine max
Glyma.06G278700 10.0kb upstream 10.0kb upstream 10252 true Chr06: 46995758-47006009 Glycine max
Glyma.06G278700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46996010-47006009 Glycine max
Glyma.06G278700 10.0kb downstream 10.0kb downstream 10252 true Chr06: 46985758-46996009 Glycine max
Glyma.06G278700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46985758-46995757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.47462 0.0 5.87958    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.54172 0.0 6.12356    
cufflinks 0.691107 0.0 2.83908    
cufflinks 0.264679 0.0 1.1635    
cufflinks 0.480142 0.0 2.0299    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0176445 0.0 0.131589 Low Low
cufflinks 0.110668 0.0 0.531525 Low  
cufflinks 0.74        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.12       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.296        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.574        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.467        
cufflinks 0.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.547        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain