Gene : Glyma.06G278600 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2786
Name:  ? Glyma.06G278600 Secondary Identifier:  ? PAC:30554004
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G278600 0.5kb upstream 0.5kb upstream 1366 true Chr06: 46993326-46994691 Glycine max
Glyma.06G278600 0.5kb upstream 0.5kb upstream 500 false Chr06: 46993326-46993825 Glycine max
Glyma.06G278600 0.5kb downstream 0.5kb downstream 1366 true Chr06: 46993826-46995191 Glycine max
Glyma.06G278600 0.5kb downstream 0.5kb downstream 500 false Chr06: 46994692-46995191 Glycine max
Glyma.06G278600 1.0kb upstream 1.0kb upstream 1866 true Chr06: 46992826-46994691 Glycine max
Glyma.06G278600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46992826-46993825 Glycine max
Glyma.06G278600 1.0kb downstream 1.0kb downstream 1866 true Chr06: 46993826-46995691 Glycine max
Glyma.06G278600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46994692-46995691 Glycine max
Glyma.06G278600 2.0kb upstream 2.0kb upstream 2866 true Chr06: 46991826-46994691 Glycine max
Glyma.06G278600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46991826-46993825 Glycine max
Glyma.06G278600 2.0kb downstream 2.0kb downstream 2866 true Chr06: 46993826-46996691 Glycine max
Glyma.06G278600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46994692-46996691 Glycine max
Glyma.06G278600 5.0kb upstream 5.0kb upstream 5866 true Chr06: 46988826-46994691 Glycine max
Glyma.06G278600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46988826-46993825 Glycine max
Glyma.06G278600 5.0kb downstream 5.0kb downstream 5866 true Chr06: 46993826-46999691 Glycine max
Glyma.06G278600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46994692-46999691 Glycine max
Glyma.06G278600 10.0kb upstream 10.0kb upstream 10866 true Chr06: 46983826-46994691 Glycine max
Glyma.06G278600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46983826-46993825 Glycine max
Glyma.06G278600 10.0kb downstream 10.0kb downstream 10866 true Chr06: 46993826-47004691 Glycine max
Glyma.06G278600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46994692-47004691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.109685 0.0 0.449255 Low  
cufflinks 0.0374901 0.0 0.166085 Low  
cufflinks 0.344001 0.0 1.34343    
cufflinks 0.145248 0.0 0.586466 Low  
cufflinks 0.00785718 0.0 0.0412246 Low Low
cufflinks 0.283211 0.0 1.11588 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.499549 0.0 1.92149   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.581       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.203        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.054        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.123       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.664        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.732        
cufflinks 0.197        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.541       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain