Gene : Glyma.06G273700 G. max Wm82.a2.v1
Defline:  (1 of 27) PTHR12411//PTHR12411:SF339 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  2737
Name:  ? Glyma.06G273700 Secondary Identifier:  ? PAC:30553640
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0 Pathways

Genomics

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Expression

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Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G273700 0.5kb upstream 0.5kb upstream 2185 true Chr06: 46463779-46465963 Glycine max
Glyma.06G273700 0.5kb upstream 0.5kb upstream 500 false Chr06: 46463779-46464278 Glycine max
Glyma.06G273700 0.5kb downstream 0.5kb downstream 2185 true Chr06: 46464279-46466463 Glycine max
Glyma.06G273700 0.5kb downstream 0.5kb downstream 500 false Chr06: 46465964-46466463 Glycine max
Glyma.06G273700 1.0kb upstream 1.0kb upstream 2685 true Chr06: 46463279-46465963 Glycine max
Glyma.06G273700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46463279-46464278 Glycine max
Glyma.06G273700 1.0kb downstream 1.0kb downstream 2685 true Chr06: 46464279-46466963 Glycine max
Glyma.06G273700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46465964-46466963 Glycine max
Glyma.06G273700 2.0kb upstream 2.0kb upstream 3685 true Chr06: 46462279-46465963 Glycine max
Glyma.06G273700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46462279-46464278 Glycine max
Glyma.06G273700 2.0kb downstream 2.0kb downstream 3685 true Chr06: 46464279-46467963 Glycine max
Glyma.06G273700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46465964-46467963 Glycine max
Glyma.06G273700 5.0kb upstream 5.0kb upstream 6685 true Chr06: 46459279-46465963 Glycine max
Glyma.06G273700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46459279-46464278 Glycine max
Glyma.06G273700 5.0kb downstream 5.0kb downstream 6685 true Chr06: 46464279-46470963 Glycine max
Glyma.06G273700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46465964-46470963 Glycine max
Glyma.06G273700 10.0kb upstream 10.0kb upstream 11685 true Chr06: 46454279-46465963 Glycine max
Glyma.06G273700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46454279-46464278 Glycine max
Glyma.06G273700 10.0kb downstream 10.0kb downstream 11685 true Chr06: 46464279-46475963 Glycine max
Glyma.06G273700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46465964-46475963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315389 5265 Fabidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00539179 0.0 0.0283915 Low  
cufflinks 0.00518845 0.0 0.027423 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00908496 0.0 0.0449019 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain