Gene : Glyma.06G231500 G. max Wm82.a2.v1
Defline:  (1 of 12) 1.1.1.37 - Malate dehydrogenase / Malic dehydrogenase Genomic Order:  2315
Name:  ? Glyma.06G231500 Secondary Identifier:  ? PAC:30553620
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G231500 0.5kb upstream 0.5kb upstream 4994 true Chr06: 36231685-36236678 Glycine max
Glyma.06G231500 0.5kb upstream 0.5kb upstream 500 false Chr06: 36231685-36232184 Glycine max
Glyma.06G231500 0.5kb downstream 0.5kb downstream 4994 true Chr06: 36232185-36237178 Glycine max
Glyma.06G231500 0.5kb downstream 0.5kb downstream 500 false Chr06: 36236679-36237178 Glycine max
Glyma.06G231500 1.0kb upstream 1.0kb upstream 5494 true Chr06: 36231185-36236678 Glycine max
Glyma.06G231500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 36231185-36232184 Glycine max
Glyma.06G231500 1.0kb downstream 1.0kb downstream 5494 true Chr06: 36232185-36237678 Glycine max
Glyma.06G231500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 36236679-36237678 Glycine max
Glyma.06G231500 2.0kb upstream 2.0kb upstream 6494 true Chr06: 36230185-36236678 Glycine max
Glyma.06G231500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 36230185-36232184 Glycine max
Glyma.06G231500 2.0kb downstream 2.0kb downstream 6494 true Chr06: 36232185-36238678 Glycine max
Glyma.06G231500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 36236679-36238678 Glycine max
Glyma.06G231500 5.0kb upstream 5.0kb upstream 9494 true Chr06: 36227185-36236678 Glycine max
Glyma.06G231500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 36227185-36232184 Glycine max
Glyma.06G231500 5.0kb downstream 5.0kb downstream 9494 true Chr06: 36232185-36241678 Glycine max
Glyma.06G231500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 36236679-36241678 Glycine max
Glyma.06G231500 10.0kb upstream 10.0kb upstream 14494 true Chr06: 36222185-36236678 Glycine max
Glyma.06G231500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 36222185-36232184 Glycine max
Glyma.06G231500 10.0kb downstream 10.0kb downstream 14494 true Chr06: 36232185-36246678 Glycine max
Glyma.06G231500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36236679-36246678 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300495 5265 Fabidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.6341 0.0 239.824 High  
cufflinks 75.537 0.0 219.123 High  
cufflinks 31.6814 0.0 85.1153 High Low
cufflinks 86.2404 0.0 254.913 High  
cufflinks 146.913 0.0 479.184 High High
cufflinks 75.2309 0.0 218.925 High  
cufflinks 72.8845 0.0 210.783 High  
cufflinks 71.0638 0.0 204.998 High  
cufflinks 103.497 0.0 315.784 High  
cufflinks 27.274     High  
cufflinks 2.238       Low
cufflinks 13.918     High  
cufflinks 42.554     High High
cufflinks 61.585     High High
cufflinks 9.418     High  
cufflinks 12.896     High  
cufflinks 8.198     High  
cufflinks 24.075     High  
cufflinks 23.346     High  
cufflinks 10.651     High  
cufflinks 4.6       Low
cufflinks 11.722     High  
cufflinks 18.864     High  
cufflinks 3.801       Low
cufflinks 10.891     High  
cufflinks 6.74     High  

0 Strain