Gene : Glyma.06G233300 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR Genomic Order:  2333
Name:  ? Glyma.06G233300 Secondary Identifier:  ? PAC:30549306
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G233300 0.5kb upstream 0.5kb upstream 6488 true Chr06: 37295144-37301631 Glycine max
Glyma.06G233300 0.5kb upstream 0.5kb upstream 500 false Chr06: 37301132-37301631 Glycine max
Glyma.06G233300 0.5kb downstream 0.5kb downstream 6488 true Chr06: 37294644-37301131 Glycine max
Glyma.06G233300 0.5kb downstream 0.5kb downstream 500 false Chr06: 37294644-37295143 Glycine max
Glyma.06G233300 1.0kb upstream 1.0kb upstream 6988 true Chr06: 37295144-37302131 Glycine max
Glyma.06G233300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 37301132-37302131 Glycine max
Glyma.06G233300 1.0kb downstream 1.0kb downstream 6988 true Chr06: 37294144-37301131 Glycine max
Glyma.06G233300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 37294144-37295143 Glycine max
Glyma.06G233300 2.0kb upstream 2.0kb upstream 7988 true Chr06: 37295144-37303131 Glycine max
Glyma.06G233300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 37301132-37303131 Glycine max
Glyma.06G233300 2.0kb downstream 2.0kb downstream 7988 true Chr06: 37293144-37301131 Glycine max
Glyma.06G233300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 37293144-37295143 Glycine max
Glyma.06G233300 5.0kb upstream 5.0kb upstream 10988 true Chr06: 37295144-37306131 Glycine max
Glyma.06G233300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 37301132-37306131 Glycine max
Glyma.06G233300 5.0kb downstream 5.0kb downstream 10988 true Chr06: 37290144-37301131 Glycine max
Glyma.06G233300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 37290144-37295143 Glycine max
Glyma.06G233300 10.0kb upstream 10.0kb upstream 15988 true Chr06: 37295144-37311131 Glycine max
Glyma.06G233300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 37301132-37311131 Glycine max
Glyma.06G233300 10.0kb downstream 10.0kb downstream 15988 true Chr06: 37285144-37301131 Glycine max
Glyma.06G233300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 37285144-37295143 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315836 5265 Fabidae View MSA
124072385 5270 Rosid View MSA
123748296 5271 Pentapetalae View MSA
122786870 5272 Eudicot View MSA
122051336 5273 Angiosperm View MSA
121351266 5274 Embryophyte View MSA
123426883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.50415 0.0 27.3335   Low
cufflinks 17.5735 0.0 84.9481   High
cufflinks 5.52849 0.0 38.5133    
cufflinks 9.79916 0.0 48.8811    
cufflinks 8.91043 0.0 49.7128    
cufflinks 4.64374 0.0 27.7361    
cufflinks 36.288 0.0 181.06 High High
cufflinks 7.12394 0.0 39.1399    
cufflinks 7.37498 0.0 44.841    
cufflinks 0.2        
cufflinks 0.178       Low
cufflinks 0.271        
cufflinks 0.208        
cufflinks 0.312        
cufflinks 0.249        
cufflinks 0.351        
cufflinks 0.169       Low
cufflinks 0.437       High
cufflinks 0.495       High
cufflinks 0.387        
cufflinks 0.176       Low
cufflinks 0.38        
cufflinks 0.368        
cufflinks 0.156       Low
cufflinks 0.339        
cufflinks 0.193        

0 Strain