Gene : Glyma.06G247100 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.3.1.33 - Protochlorophyllide reductase / Protochlorophyllide oxidoreductase Genomic Order:  2471
Name:  ? Glyma.06G247100 Secondary Identifier:  ? PAC:30550536
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G247100 0.5kb upstream 0.5kb upstream 3817 true Chr06: 41695801-41699617 Glycine max
Glyma.06G247100 0.5kb upstream 0.5kb upstream 500 false Chr06: 41699118-41699617 Glycine max
Glyma.06G247100 0.5kb downstream 0.5kb downstream 3817 true Chr06: 41695301-41699117 Glycine max
Glyma.06G247100 0.5kb downstream 0.5kb downstream 500 false Chr06: 41695301-41695800 Glycine max
Glyma.06G247100 1.0kb upstream 1.0kb upstream 4317 true Chr06: 41695801-41700117 Glycine max
Glyma.06G247100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 41699118-41700117 Glycine max
Glyma.06G247100 1.0kb downstream 1.0kb downstream 4317 true Chr06: 41694801-41699117 Glycine max
Glyma.06G247100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 41694801-41695800 Glycine max
Glyma.06G247100 2.0kb upstream 2.0kb upstream 5317 true Chr06: 41695801-41701117 Glycine max
Glyma.06G247100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 41699118-41701117 Glycine max
Glyma.06G247100 2.0kb downstream 2.0kb downstream 5317 true Chr06: 41693801-41699117 Glycine max
Glyma.06G247100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 41693801-41695800 Glycine max
Glyma.06G247100 5.0kb upstream 5.0kb upstream 8317 true Chr06: 41695801-41704117 Glycine max
Glyma.06G247100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 41699118-41704117 Glycine max
Glyma.06G247100 5.0kb downstream 5.0kb downstream 8317 true Chr06: 41690801-41699117 Glycine max
Glyma.06G247100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41690801-41695800 Glycine max
Glyma.06G247100 10.0kb upstream 10.0kb upstream 13317 true Chr06: 41695801-41709117 Glycine max
Glyma.06G247100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 41699118-41709117 Glycine max
Glyma.06G247100 10.0kb downstream 10.0kb downstream 13317 true Chr06: 41685801-41699117 Glycine max
Glyma.06G247100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 41685801-41695800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254892 5265 Fabidae View MSA
124070755 5270 Rosid View MSA
123740170 5271 Pentapetalae View MSA
122791290 5272 Eudicot View MSA
122047263 5273 Angiosperm View MSA
121349399 5274 Embryophyte View MSA
123427547 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.7604 0.0 177.726 High  
cufflinks 137.906 0.0 467.915 High High
cufflinks 24.9439 0.0 67.1604 High  
cufflinks 33.2309 0.0 91.0581 High  
cufflinks 11.9869 0.0 32.142    
cufflinks 7.902 0.0 21.6504    
cufflinks 135.259 0.0 458.098 High High
cufflinks 19.3646 0.0 51.7511    
cufflinks 1.32544 0.0 4.52907   Low
cufflinks 27.264     High  
cufflinks 0.042     Low Low
cufflinks 50.077     High  
cufflinks 0.015     Low Low
cufflinks 0.065     Low Low
cufflinks 0.199        
cufflinks 184.841     High  
cufflinks 0.34        
cufflinks 59.444     High  
cufflinks 94.441     High  
cufflinks 312.471     High High
cufflinks 0.037     Low Low
cufflinks 346.913     High High
cufflinks 150.143     High  
cufflinks 0.053     Low Low
cufflinks 283.858     High High
cufflinks 0.098        

0 Strain