Gene : Glyma.06G203300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10000//PTHR10000:SF13 - PHOSPHOSERINE PHOSPHATASE Genomic Order:  2033
Name:  ? Glyma.06G203300 Secondary Identifier:  ? PAC:30551118
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax SER-GLYSYN-PWY Glycine max pathologic  
Gmax SERSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G203300 0.5kb upstream 0.5kb upstream 5150 true Chr06: 19025214-19030363 Glycine max
Glyma.06G203300 0.5kb upstream 0.5kb upstream 500 false Chr06: 19025214-19025713 Glycine max
Glyma.06G203300 0.5kb downstream 0.5kb downstream 5150 true Chr06: 19025714-19030863 Glycine max
Glyma.06G203300 0.5kb downstream 0.5kb downstream 500 false Chr06: 19030364-19030863 Glycine max
Glyma.06G203300 1.0kb upstream 1.0kb upstream 5650 true Chr06: 19024714-19030363 Glycine max
Glyma.06G203300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19024714-19025713 Glycine max
Glyma.06G203300 1.0kb downstream 1.0kb downstream 5650 true Chr06: 19025714-19031363 Glycine max
Glyma.06G203300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19030364-19031363 Glycine max
Glyma.06G203300 2.0kb upstream 2.0kb upstream 6650 true Chr06: 19023714-19030363 Glycine max
Glyma.06G203300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19023714-19025713 Glycine max
Glyma.06G203300 2.0kb downstream 2.0kb downstream 6650 true Chr06: 19025714-19032363 Glycine max
Glyma.06G203300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19030364-19032363 Glycine max
Glyma.06G203300 5.0kb upstream 5.0kb upstream 9650 true Chr06: 19020714-19030363 Glycine max
Glyma.06G203300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19020714-19025713 Glycine max
Glyma.06G203300 5.0kb downstream 5.0kb downstream 9650 true Chr06: 19025714-19035363 Glycine max
Glyma.06G203300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19030364-19035363 Glycine max
Glyma.06G203300 10.0kb upstream 10.0kb upstream 14650 true Chr06: 19015714-19030363 Glycine max
Glyma.06G203300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19015714-19025713 Glycine max
Glyma.06G203300 10.0kb downstream 10.0kb downstream 14650 true Chr06: 19025714-19040363 Glycine max
Glyma.06G203300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19030364-19040363 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300897 5265 Fabidae View MSA
124065988 5270 Rosid View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.16824 0.0 29.3151    
cufflinks 8.44272 0.0 32.9143    
cufflinks 3.45981 0.0 17.6662   Low
cufflinks 10.1642 0.0 38.063    
cufflinks 12.5591 0.0 50.4391    
cufflinks 6.66914 0.0 23.4238    
cufflinks 8.92433 0.0 34.3758    
cufflinks 11.4944 0.0 42.0602    
cufflinks 14.685 0.0 52.2491   High
cufflinks 1.375       High
cufflinks 0.254       Low
cufflinks 0.654        
cufflinks 1.146        
cufflinks 1.359       High
cufflinks 0.907        
cufflinks 0.742        
cufflinks 0.537        
cufflinks 1.029        
cufflinks 1.018        
cufflinks 0.872        
cufflinks 0.31       Low
cufflinks 0.891        
cufflinks 0.658        
cufflinks 0.354       Low
cufflinks 0.824        
cufflinks 0.451        

0 Strain