Gene : Glyma.06G220300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10434 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE Genomic Order:  2203
Name:  ? Glyma.06G220300 Secondary Identifier:  ? PAC:30552535
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1319 Glycine max pathologic  
Gmax PWY4FS-7 Glycine max pathologic  
Gmax PWY-7411 Glycine max pathologic  
Gmax PWY-7417 Glycine max pathologic  
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G220300 0.5kb upstream 0.5kb upstream 11461 true Chr06: 26149926-26161386 Glycine max
Glyma.06G220300 0.5kb upstream 0.5kb upstream 500 false Chr06: 26160887-26161386 Glycine max
Glyma.06G220300 0.5kb downstream 0.5kb downstream 11461 true Chr06: 26149426-26160886 Glycine max
Glyma.06G220300 0.5kb downstream 0.5kb downstream 500 false Chr06: 26149426-26149925 Glycine max
Glyma.06G220300 1.0kb upstream 1.0kb upstream 11961 true Chr06: 26149926-26161886 Glycine max
Glyma.06G220300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26160887-26161886 Glycine max
Glyma.06G220300 1.0kb downstream 1.0kb downstream 11961 true Chr06: 26148926-26160886 Glycine max
Glyma.06G220300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26148926-26149925 Glycine max
Glyma.06G220300 2.0kb upstream 2.0kb upstream 12961 true Chr06: 26149926-26162886 Glycine max
Glyma.06G220300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26160887-26162886 Glycine max
Glyma.06G220300 2.0kb downstream 2.0kb downstream 12961 true Chr06: 26147926-26160886 Glycine max
Glyma.06G220300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26147926-26149925 Glycine max
Glyma.06G220300 5.0kb upstream 5.0kb upstream 15961 true Chr06: 26149926-26165886 Glycine max
Glyma.06G220300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26160887-26165886 Glycine max
Glyma.06G220300 5.0kb downstream 5.0kb downstream 15961 true Chr06: 26144926-26160886 Glycine max
Glyma.06G220300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26144926-26149925 Glycine max
Glyma.06G220300 10.0kb upstream 10.0kb upstream 20961 true Chr06: 26149926-26170886 Glycine max
Glyma.06G220300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26160887-26170886 Glycine max
Glyma.06G220300 10.0kb downstream 10.0kb downstream 20961 true Chr06: 26139926-26160886 Glycine max
Glyma.06G220300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26139926-26149925 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304681 5265 Fabidae View MSA
124067768 5270 Rosid View MSA
123747235 5271 Pentapetalae View MSA
122790881 5272 Eudicot View MSA
122045911 5273 Angiosperm View MSA
121346348 5274 Embryophyte View MSA
123426206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.14869 0.0 15.3337    
cufflinks 2.98669 0.0 14.3163    
cufflinks 1.63976 0.0 6.90408   Low
cufflinks 2.77238 0.0 14.0903    
cufflinks 2.1831 0.0 11.7051    
cufflinks 2.1424 0.0 11.052    
cufflinks 1.94535 0.0 10.3984    
cufflinks 3.43009 0.0 15.8022   High
cufflinks 1.28968 0.0 7.64387   Low
cufflinks 0.097     Low  
cufflinks 0.036     Low Low
cufflinks 0.09     Low  
cufflinks 0.106        
cufflinks 0.121        
cufflinks 0.013     Low Low
cufflinks 0.121        
cufflinks 0.042     Low  
cufflinks 0.099     Low  
cufflinks 0.129        
cufflinks 0.135        
cufflinks 0.038     Low Low
cufflinks 0.125        
cufflinks 0.116        
cufflinks 0.057     Low  
cufflinks 0.13        
cufflinks 0.038     Low Low

0 Strain