Gene : Glyma.06G178900 G. max Wm82.a2.v1
Defline:  (1 of 91) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  1789
Name:  ? Glyma.06G178900 Secondary Identifier:  ? PAC:30553843
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G178900 0.5kb upstream 0.5kb upstream 3283 true Chr06: 15178513-15181795 Glycine max
Glyma.06G178900 0.5kb upstream 0.5kb upstream 500 false Chr06: 15181296-15181795 Glycine max
Glyma.06G178900 0.5kb downstream 0.5kb downstream 3283 true Chr06: 15178013-15181295 Glycine max
Glyma.06G178900 0.5kb downstream 0.5kb downstream 500 false Chr06: 15178013-15178512 Glycine max
Glyma.06G178900 1.0kb upstream 1.0kb upstream 3783 true Chr06: 15178513-15182295 Glycine max
Glyma.06G178900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15181296-15182295 Glycine max
Glyma.06G178900 1.0kb downstream 1.0kb downstream 3783 true Chr06: 15177513-15181295 Glycine max
Glyma.06G178900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15177513-15178512 Glycine max
Glyma.06G178900 2.0kb upstream 2.0kb upstream 4783 true Chr06: 15178513-15183295 Glycine max
Glyma.06G178900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15181296-15183295 Glycine max
Glyma.06G178900 2.0kb downstream 2.0kb downstream 4783 true Chr06: 15176513-15181295 Glycine max
Glyma.06G178900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15176513-15178512 Glycine max
Glyma.06G178900 5.0kb upstream 5.0kb upstream 7783 true Chr06: 15178513-15186295 Glycine max
Glyma.06G178900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15181296-15186295 Glycine max
Glyma.06G178900 5.0kb downstream 5.0kb downstream 7783 true Chr06: 15173513-15181295 Glycine max
Glyma.06G178900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15173513-15178512 Glycine max
Glyma.06G178900 10.0kb upstream 10.0kb upstream 12783 true Chr06: 15178513-15191295 Glycine max
Glyma.06G178900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15181296-15191295 Glycine max
Glyma.06G178900 10.0kb downstream 10.0kb downstream 12783 true Chr06: 15168513-15181295 Glycine max
Glyma.06G178900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15168513-15178512 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.23233 0.0 26.5402   High
cufflinks 0.194866 0.0 1.48345 Low  
cufflinks 0.0282682 0.0 0.137215 Low Low
cufflinks 0.553839 0.0 3.73747    
cufflinks 0.362334 0.0 2.46374    
cufflinks 0.0226698 0.0 0.106819 Low Low
cufflinks 0.387839 0.0 1.91006    
cufflinks 0.725616 0.0 4.54418    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.085     Low  
cufflinks 0.057     Low  
cufflinks 0.003     Low Low
cufflinks 0.006     Low Low
cufflinks 0.063     Low  
cufflinks 0.092        
cufflinks 0.291       High
cufflinks 0.554       High
cufflinks 0.003     Low Low
cufflinks 0.029     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.036     Low  
cufflinks 0.022     Low  

0 Strain