Gene : Glyma.06G186300 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.2.1.8 - Betaine-aldehyde dehydrogenase / Betaine aldehyde oxidase Genomic Order:  1863
Name:  ? Glyma.06G186300 Secondary Identifier:  ? PAC:30552288
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY1F-353 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G186300 0.5kb upstream 0.5kb upstream 6508 true Chr06: 16210717-16217224 Glycine max
Glyma.06G186300 0.5kb upstream 0.5kb upstream 500 false Chr06: 16210717-16211216 Glycine max
Glyma.06G186300 0.5kb downstream 0.5kb downstream 6508 true Chr06: 16211217-16217724 Glycine max
Glyma.06G186300 0.5kb downstream 0.5kb downstream 500 false Chr06: 16217225-16217724 Glycine max
Glyma.06G186300 1.0kb upstream 1.0kb upstream 7008 true Chr06: 16210217-16217224 Glycine max
Glyma.06G186300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16210217-16211216 Glycine max
Glyma.06G186300 1.0kb downstream 1.0kb downstream 7008 true Chr06: 16211217-16218224 Glycine max
Glyma.06G186300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16217225-16218224 Glycine max
Glyma.06G186300 2.0kb upstream 2.0kb upstream 8008 true Chr06: 16209217-16217224 Glycine max
Glyma.06G186300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16209217-16211216 Glycine max
Glyma.06G186300 2.0kb downstream 2.0kb downstream 8008 true Chr06: 16211217-16219224 Glycine max
Glyma.06G186300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16217225-16219224 Glycine max
Glyma.06G186300 5.0kb upstream 5.0kb upstream 11008 true Chr06: 16206217-16217224 Glycine max
Glyma.06G186300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16206217-16211216 Glycine max
Glyma.06G186300 5.0kb downstream 5.0kb downstream 11008 true Chr06: 16211217-16222224 Glycine max
Glyma.06G186300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16217225-16222224 Glycine max
Glyma.06G186300 10.0kb upstream 10.0kb upstream 16008 true Chr06: 16201217-16217224 Glycine max
Glyma.06G186300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16201217-16211216 Glycine max
Glyma.06G186300 10.0kb downstream 10.0kb downstream 16008 true Chr06: 16211217-16227224 Glycine max
Glyma.06G186300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16217225-16227224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310378 5265 Fabidae View MSA
124063957 5270 Rosid View MSA
123742074 5271 Pentapetalae View MSA
122792963 5272 Eudicot View MSA
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9006 0.0 67.0683   Low
cufflinks 17.8296 0.0 60.2202   Low
cufflinks 137.813 0.0 797.918 High  
cufflinks 108.25 0.0 554.745 High  
cufflinks 369.15 0.0 4228.69 High  
cufflinks 914.34 0.0 25539.8 High High
cufflinks 21.4527 0.0 74.8793   Low
cufflinks 108.742 0.0 559.574 High  
cufflinks 283.965 0.0 2627.25 High  
cufflinks 8.521     High  
cufflinks 35.048     High  
cufflinks 15.727     High  
cufflinks 66.856     High High
cufflinks 43.468     High  
cufflinks 15.402     High  
cufflinks 2.89        
cufflinks 47.304     High High
cufflinks 6.272        
cufflinks 2.446       Low
cufflinks 1.314       Low
cufflinks 39.936     High  
cufflinks 2.6       Low
cufflinks 1.894       Low
cufflinks 36.933     High  
cufflinks 1.784       Low
cufflinks 59.386     High High

0 Strain