Gene : Glyma.06G154100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN Genomic Order:  1541
Name:  ? Glyma.06G154100 Secondary Identifier:  ? PAC:30549318
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G154100 0.5kb upstream 0.5kb upstream 1685 true Chr06: 12565656-12567340 Glycine max
Glyma.06G154100 0.5kb upstream 0.5kb upstream 500 false Chr06: 12566841-12567340 Glycine max
Glyma.06G154100 0.5kb downstream 0.5kb downstream 1685 true Chr06: 12565156-12566840 Glycine max
Glyma.06G154100 0.5kb downstream 0.5kb downstream 500 false Chr06: 12565156-12565655 Glycine max
Glyma.06G154100 1.0kb upstream 1.0kb upstream 2185 true Chr06: 12565656-12567840 Glycine max
Glyma.06G154100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12566841-12567840 Glycine max
Glyma.06G154100 1.0kb downstream 1.0kb downstream 2185 true Chr06: 12564656-12566840 Glycine max
Glyma.06G154100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12564656-12565655 Glycine max
Glyma.06G154100 2.0kb upstream 2.0kb upstream 3185 true Chr06: 12565656-12568840 Glycine max
Glyma.06G154100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12566841-12568840 Glycine max
Glyma.06G154100 2.0kb downstream 2.0kb downstream 3185 true Chr06: 12563656-12566840 Glycine max
Glyma.06G154100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12563656-12565655 Glycine max
Glyma.06G154100 5.0kb upstream 5.0kb upstream 6185 true Chr06: 12565656-12571840 Glycine max
Glyma.06G154100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12566841-12571840 Glycine max
Glyma.06G154100 5.0kb downstream 5.0kb downstream 6185 true Chr06: 12560656-12566840 Glycine max
Glyma.06G154100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12560656-12565655 Glycine max
Glyma.06G154100 10.0kb upstream 10.0kb upstream 11185 true Chr06: 12565656-12576840 Glycine max
Glyma.06G154100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12566841-12576840 Glycine max
Glyma.06G154100 10.0kb downstream 10.0kb downstream 11185 true Chr06: 12555656-12566840 Glycine max
Glyma.06G154100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12555656-12565655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308708 5265 Fabidae View MSA
124070063 5270 Rosid View MSA
123742248 5271 Pentapetalae View MSA
122794681 5272 Eudicot View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.74427 0.0 2.76634    
cufflinks 0.903878 0.0 3.32112    
cufflinks 4.71395 0.0 14.6746   High
cufflinks 0.545449 0.0 2.05329    
cufflinks 1.31468 0.0 4.72409    
cufflinks 0.873239 0.0 3.21657    
cufflinks 0.362221 0.0 1.38973   Low
cufflinks 1.71176 0.0 6.01736    
cufflinks 1.92676 0.0 6.70785    
cufflinks 0.178       Low
cufflinks 0.267        
cufflinks 2.651       High
cufflinks 0.746        
cufflinks 0.36        
cufflinks 0.128       Low
cufflinks 1.322        
cufflinks 0.231       Low
cufflinks 0.84        
cufflinks 0.687        
cufflinks 1.019        
cufflinks 0.29        
cufflinks 1.282        
cufflinks 1.521       High
cufflinks 0.375        
cufflinks 0.985        
cufflinks 0.458        

0 Strain