Gene : Glyma.06G126700 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  1267
Name:  ? Glyma.06G126700 Secondary Identifier:  ? PAC:30551509
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSPECAT-PWY Glycine max pathologic  
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G126700 0.5kb upstream 0.5kb upstream 5308 true Chr06: 10384771-10390078 Glycine max
Glyma.06G126700 0.5kb upstream 0.5kb upstream 500 false Chr06: 10389579-10390078 Glycine max
Glyma.06G126700 0.5kb downstream 0.5kb downstream 5308 true Chr06: 10384271-10389578 Glycine max
Glyma.06G126700 0.5kb downstream 0.5kb downstream 500 false Chr06: 10384271-10384770 Glycine max
Glyma.06G126700 1.0kb upstream 1.0kb upstream 5808 true Chr06: 10384771-10390578 Glycine max
Glyma.06G126700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10389579-10390578 Glycine max
Glyma.06G126700 1.0kb downstream 1.0kb downstream 5808 true Chr06: 10383771-10389578 Glycine max
Glyma.06G126700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10383771-10384770 Glycine max
Glyma.06G126700 2.0kb upstream 2.0kb upstream 6808 true Chr06: 10384771-10391578 Glycine max
Glyma.06G126700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10389579-10391578 Glycine max
Glyma.06G126700 2.0kb downstream 2.0kb downstream 6808 true Chr06: 10382771-10389578 Glycine max
Glyma.06G126700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10382771-10384770 Glycine max
Glyma.06G126700 5.0kb upstream 5.0kb upstream 9808 true Chr06: 10384771-10394578 Glycine max
Glyma.06G126700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10389579-10394578 Glycine max
Glyma.06G126700 5.0kb downstream 5.0kb downstream 9808 true Chr06: 10379771-10389578 Glycine max
Glyma.06G126700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10379771-10384770 Glycine max
Glyma.06G126700 10.0kb upstream 10.0kb upstream 14808 true Chr06: 10384771-10399578 Glycine max
Glyma.06G126700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10389579-10399578 Glycine max
Glyma.06G126700 10.0kb downstream 10.0kb downstream 14808 true Chr06: 10374771-10389578 Glycine max
Glyma.06G126700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10374771-10384770 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304285 5265 Fabidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.03171 0.0 24.194   Low
cufflinks 14.2896 0.0 55.1658    
cufflinks 8.91934 0.0 35.7478    
cufflinks 10.5462 0.0 40.5259    
cufflinks 17.6596 0.0 64.6696    
cufflinks 11.7164 0.0 45.5417    
cufflinks 9.56673 0.0 38.6663    
cufflinks 7.73417 0.0 32.3134    
cufflinks 32.9737 0.0 124.877 High High
cufflinks 0.867        
cufflinks 0.343       Low
cufflinks 1.077        
cufflinks 0.943        
cufflinks 0.994        
cufflinks 1.686       High
cufflinks 0.77        
cufflinks 0.585        
cufflinks 1.32       High
cufflinks 1.624       High
cufflinks 0.458       Low
cufflinks 0.434       Low
cufflinks 0.597        
cufflinks 0.659        
cufflinks 0.58        
cufflinks 0.609        
cufflinks 0.874        

0 Strain