Gene : Glyma.06G136600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR26402//PTHR26402:SF560 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  1366
Name:  ? Glyma.06G136600 Secondary Identifier:  ? PAC:30550146
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G136600 0.5kb upstream 0.5kb upstream 5250 true Chr06: 11182202-11187451 Glycine max
Glyma.06G136600 0.5kb upstream 0.5kb upstream 500 false Chr06: 11182202-11182701 Glycine max
Glyma.06G136600 0.5kb downstream 0.5kb downstream 5250 true Chr06: 11182702-11187951 Glycine max
Glyma.06G136600 0.5kb downstream 0.5kb downstream 500 false Chr06: 11187452-11187951 Glycine max
Glyma.06G136600 1.0kb upstream 1.0kb upstream 5750 true Chr06: 11181702-11187451 Glycine max
Glyma.06G136600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11181702-11182701 Glycine max
Glyma.06G136600 1.0kb downstream 1.0kb downstream 5750 true Chr06: 11182702-11188451 Glycine max
Glyma.06G136600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11187452-11188451 Glycine max
Glyma.06G136600 2.0kb upstream 2.0kb upstream 6750 true Chr06: 11180702-11187451 Glycine max
Glyma.06G136600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11180702-11182701 Glycine max
Glyma.06G136600 2.0kb downstream 2.0kb downstream 6750 true Chr06: 11182702-11189451 Glycine max
Glyma.06G136600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11187452-11189451 Glycine max
Glyma.06G136600 5.0kb upstream 5.0kb upstream 9750 true Chr06: 11177702-11187451 Glycine max
Glyma.06G136600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11177702-11182701 Glycine max
Glyma.06G136600 5.0kb downstream 5.0kb downstream 9750 true Chr06: 11182702-11192451 Glycine max
Glyma.06G136600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11187452-11192451 Glycine max
Glyma.06G136600 10.0kb upstream 10.0kb upstream 14750 true Chr06: 11172702-11187451 Glycine max
Glyma.06G136600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11172702-11182701 Glycine max
Glyma.06G136600 10.0kb downstream 10.0kb downstream 14750 true Chr06: 11182702-11197451 Glycine max
Glyma.06G136600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11187452-11197451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308021 5265 Fabidae View MSA
124070705 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5027 0.0 148.981 High High
cufflinks 6.2704 0.0 22.2216    
cufflinks 19.3509 0.0 75.2082   High
cufflinks 4.85046 0.0 17.8553    
cufflinks 2.93095 0.0 12.3498    
cufflinks 2.17941 0.0 8.69489   Low
cufflinks 2.93363 0.0 12.5917    
cufflinks 9.98311 0.0 33.7189    
cufflinks 5.16834 0.0 16.2885    
cufflinks 0.385       Low
cufflinks 11.08     High High
cufflinks 2.419        
cufflinks 0.382       Low
cufflinks 0.329       Low
cufflinks 5.857     High  
cufflinks 2.94        
cufflinks 2.412        
cufflinks 2.362        
cufflinks 0.977        
cufflinks 6.007        
cufflinks 16.227     High High
cufflinks 4.894        
cufflinks 3.82        
cufflinks 11.133     High High
cufflinks 5.384        
cufflinks 9.478     High  

0 Strain