Gene : Glyma.06G076000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10410:SF6 - COP9 SIGNALOSOME COMPLEX SUBUNIT 5 Genomic Order:  760
Name:  ? Glyma.06G076000 Secondary Identifier:  ? PAC:30551876
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G076000 0.5kb upstream 0.5kb upstream 4654 true Chr06: 5880448-5885101 Glycine max
Glyma.06G076000 0.5kb upstream 0.5kb upstream 500 false Chr06: 5880448-5880947 Glycine max
Glyma.06G076000 0.5kb downstream 0.5kb downstream 4654 true Chr06: 5880948-5885601 Glycine max
Glyma.06G076000 0.5kb downstream 0.5kb downstream 500 false Chr06: 5885102-5885601 Glycine max
Glyma.06G076000 1.0kb upstream 1.0kb upstream 5154 true Chr06: 5879948-5885101 Glycine max
Glyma.06G076000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5879948-5880947 Glycine max
Glyma.06G076000 1.0kb downstream 1.0kb downstream 5154 true Chr06: 5880948-5886101 Glycine max
Glyma.06G076000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5885102-5886101 Glycine max
Glyma.06G076000 2.0kb upstream 2.0kb upstream 6154 true Chr06: 5878948-5885101 Glycine max
Glyma.06G076000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5878948-5880947 Glycine max
Glyma.06G076000 2.0kb downstream 2.0kb downstream 6154 true Chr06: 5880948-5887101 Glycine max
Glyma.06G076000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5885102-5887101 Glycine max
Glyma.06G076000 5.0kb upstream 5.0kb upstream 9154 true Chr06: 5875948-5885101 Glycine max
Glyma.06G076000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5875948-5880947 Glycine max
Glyma.06G076000 5.0kb downstream 5.0kb downstream 9154 true Chr06: 5880948-5890101 Glycine max
Glyma.06G076000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5885102-5890101 Glycine max
Glyma.06G076000 10.0kb upstream 10.0kb upstream 14154 true Chr06: 5870948-5885101 Glycine max
Glyma.06G076000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5870948-5880947 Glycine max
Glyma.06G076000 10.0kb downstream 10.0kb downstream 14154 true Chr06: 5880948-5895101 Glycine max
Glyma.06G076000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5885102-5895101 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299162 5265 Fabidae View MSA
124062385 5270 Rosid View MSA
123748125 5271 Pentapetalae View MSA
122791639 5272 Eudicot View MSA
122043693 5273 Angiosperm View MSA
121347496 5274 Embryophyte View MSA
123424807 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5827 0.0 71.2073   Low
cufflinks 24.8292 0.0 92.4994 High  
cufflinks 15.5261 0.0 60.8502   Low
cufflinks 27.7406 0.0 129.539 High  
cufflinks 30.4102 0.0 108.581 High High
cufflinks 20.3905 0.0 69.7474    
cufflinks 23.922 0.0 99.4191 High  
cufflinks 26.4832 0.0 91.732 High  
cufflinks 22.9539 0.0 80.1376 High  
cufflinks 1.945        
cufflinks 1.016       Low
cufflinks 1.616        
cufflinks 2.38        
cufflinks 2.992       High
cufflinks 1.478        
cufflinks 2.059        
cufflinks 1.045       Low
cufflinks 1.79        
cufflinks 2.779       High
cufflinks 2.135        
cufflinks 1.255       Low
cufflinks 1.975        
cufflinks 1.928        
cufflinks 1.159       Low
cufflinks 2.05        
cufflinks 1.485        

0 Strain