Gene : Glyma.06G083700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 Genomic Order:  837
Name:  ? Glyma.06G083700 Secondary Identifier:  ? PAC:30551008
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G083700 0.5kb upstream 0.5kb upstream 8578 true Chr06: 6439258-6447835 Glycine max
Glyma.06G083700 0.5kb upstream 0.5kb upstream 500 false Chr06: 6447336-6447835 Glycine max
Glyma.06G083700 0.5kb downstream 0.5kb downstream 8578 true Chr06: 6438758-6447335 Glycine max
Glyma.06G083700 0.5kb downstream 0.5kb downstream 500 false Chr06: 6438758-6439257 Glycine max
Glyma.06G083700 1.0kb upstream 1.0kb upstream 9078 true Chr06: 6439258-6448335 Glycine max
Glyma.06G083700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6447336-6448335 Glycine max
Glyma.06G083700 1.0kb downstream 1.0kb downstream 9078 true Chr06: 6438258-6447335 Glycine max
Glyma.06G083700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6438258-6439257 Glycine max
Glyma.06G083700 2.0kb upstream 2.0kb upstream 10078 true Chr06: 6439258-6449335 Glycine max
Glyma.06G083700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6447336-6449335 Glycine max
Glyma.06G083700 2.0kb downstream 2.0kb downstream 10078 true Chr06: 6437258-6447335 Glycine max
Glyma.06G083700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6437258-6439257 Glycine max
Glyma.06G083700 5.0kb upstream 5.0kb upstream 13078 true Chr06: 6439258-6452335 Glycine max
Glyma.06G083700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6447336-6452335 Glycine max
Glyma.06G083700 5.0kb downstream 5.0kb downstream 13078 true Chr06: 6434258-6447335 Glycine max
Glyma.06G083700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6434258-6439257 Glycine max
Glyma.06G083700 10.0kb upstream 10.0kb upstream 18078 true Chr06: 6439258-6457335 Glycine max
Glyma.06G083700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6447336-6457335 Glycine max
Glyma.06G083700 10.0kb downstream 10.0kb downstream 18078 true Chr06: 6429258-6447335 Glycine max
Glyma.06G083700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 6429258-6439257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304423 5265 Fabidae View MSA
124063499 5270 Rosid View MSA
123736612 5271 Pentapetalae View MSA
122785753 5272 Eudicot View MSA
122044335 5273 Angiosperm View MSA
121345434 5274 Embryophyte View MSA
123428246 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.2846 0.0 67.4987 High  
cufflinks 22.3019 0.0 61.5875 High  
cufflinks 16.5552 0.0 44.8673   Low
cufflinks 25.8793 0.0 72.518 High  
cufflinks 33.6978 0.0 97.0738 High High
cufflinks 26.9368 0.0 75.7693 High  
cufflinks 30.3979 0.0 86.3585 High  
cufflinks 21.1125 0.0 58.0337 High  
cufflinks 26.6764 0.0 74.9607 High  
cufflinks 12.564     High  
cufflinks 4.052       Low
cufflinks 10.222     High  
cufflinks 22.015     High High
cufflinks 29.14     High High
cufflinks 3.777       Low
cufflinks 7.494     High  
cufflinks 6.699     High  
cufflinks 12.902     High  
cufflinks 12.201     High  
cufflinks 6.457        
cufflinks 5.336        
cufflinks 7.529     High  
cufflinks 9.114     High  
cufflinks 6.213     High  
cufflinks 6.601        
cufflinks 6.267        

0 Strain