Gene : Glyma.06G046400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22850:SF2 - COMPONENT OF GEMS PROTEIN 5 Genomic Order:  464
Name:  ? Glyma.06G046400 Secondary Identifier:  ? PAC:30552286
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G046400 0.5kb upstream 0.5kb upstream 4559 true Chr06: 3515459-3520017 Glycine max
Glyma.06G046400 0.5kb upstream 0.5kb upstream 500 false Chr06: 3515459-3515958 Glycine max
Glyma.06G046400 0.5kb downstream 0.5kb downstream 4559 true Chr06: 3515959-3520517 Glycine max
Glyma.06G046400 0.5kb downstream 0.5kb downstream 500 false Chr06: 3520018-3520517 Glycine max
Glyma.06G046400 1.0kb upstream 1.0kb upstream 5059 true Chr06: 3514959-3520017 Glycine max
Glyma.06G046400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3514959-3515958 Glycine max
Glyma.06G046400 1.0kb downstream 1.0kb downstream 5059 true Chr06: 3515959-3521017 Glycine max
Glyma.06G046400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3520018-3521017 Glycine max
Glyma.06G046400 2.0kb upstream 2.0kb upstream 6059 true Chr06: 3513959-3520017 Glycine max
Glyma.06G046400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3513959-3515958 Glycine max
Glyma.06G046400 2.0kb downstream 2.0kb downstream 6059 true Chr06: 3515959-3522017 Glycine max
Glyma.06G046400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3520018-3522017 Glycine max
Glyma.06G046400 5.0kb upstream 5.0kb upstream 9059 true Chr06: 3510959-3520017 Glycine max
Glyma.06G046400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3510959-3515958 Glycine max
Glyma.06G046400 5.0kb downstream 5.0kb downstream 9059 true Chr06: 3515959-3525017 Glycine max
Glyma.06G046400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3520018-3525017 Glycine max
Glyma.06G046400 10.0kb upstream 10.0kb upstream 14059 true Chr06: 3505959-3520017 Glycine max
Glyma.06G046400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3505959-3515958 Glycine max
Glyma.06G046400 10.0kb downstream 10.0kb downstream 14059 true Chr06: 3515959-3530017 Glycine max
Glyma.06G046400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3520018-3530017 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302464 5265 Fabidae View MSA
124061606 5270 Rosid View MSA
123745162 5271 Pentapetalae View MSA
122789618 5272 Eudicot View MSA
122042758 5273 Angiosperm View MSA
123429007 5275 Viridiplantae View MSA
121346224 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43469 0.0 4.83877    
cufflinks 1.55943 0.0 5.21762    
cufflinks 38.5757 0.0 107.515 High High
cufflinks 2.07127 0.0 6.6578    
cufflinks 1.34074 0.0 4.55268    
cufflinks 1.11009 0.0 3.84907    
cufflinks 4.11715 0.0 12.0155    
cufflinks 2.61675 0.0 8.12896    
cufflinks 1.14261 0.0 3.94998    
cufflinks 0.743        
cufflinks 2.726       High
cufflinks 12.538     High High
cufflinks 1.776        
cufflinks 0.954        
cufflinks 1.414        
cufflinks 0.409       Low
cufflinks 0.59        
cufflinks 1.013        
cufflinks 0.621        
cufflinks 0.419        
cufflinks 1.389        
cufflinks 0.473        
cufflinks 0.388       Low
cufflinks 2.226        
cufflinks 0.444        
cufflinks 1.584        

0 Strain