Gene : Glyma.06G055400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31618:SF3 - MECHANOSENSITIVE ION CHANNEL PROTEIN 10-RELATED Genomic Order:  554
Name:  ? Glyma.06G055400 Secondary Identifier:  ? PAC:30550980
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G055400 0.5kb upstream 0.5kb upstream 4820 true Chr06: 4191881-4196700 Glycine max
Glyma.06G055400 0.5kb upstream 0.5kb upstream 500 false Chr06: 4191881-4192380 Glycine max
Glyma.06G055400 0.5kb downstream 0.5kb downstream 4820 true Chr06: 4192381-4197200 Glycine max
Glyma.06G055400 0.5kb downstream 0.5kb downstream 500 false Chr06: 4196701-4197200 Glycine max
Glyma.06G055400 1.0kb upstream 1.0kb upstream 5320 true Chr06: 4191381-4196700 Glycine max
Glyma.06G055400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4191381-4192380 Glycine max
Glyma.06G055400 1.0kb downstream 1.0kb downstream 5320 true Chr06: 4192381-4197700 Glycine max
Glyma.06G055400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4196701-4197700 Glycine max
Glyma.06G055400 2.0kb upstream 2.0kb upstream 6320 true Chr06: 4190381-4196700 Glycine max
Glyma.06G055400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4190381-4192380 Glycine max
Glyma.06G055400 2.0kb downstream 2.0kb downstream 6320 true Chr06: 4192381-4198700 Glycine max
Glyma.06G055400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4196701-4198700 Glycine max
Glyma.06G055400 5.0kb upstream 5.0kb upstream 9320 true Chr06: 4187381-4196700 Glycine max
Glyma.06G055400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4187381-4192380 Glycine max
Glyma.06G055400 5.0kb downstream 5.0kb downstream 9320 true Chr06: 4192381-4201700 Glycine max
Glyma.06G055400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4196701-4201700 Glycine max
Glyma.06G055400 10.0kb upstream 10.0kb upstream 14320 true Chr06: 4182381-4196700 Glycine max
Glyma.06G055400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4182381-4192380 Glycine max
Glyma.06G055400 10.0kb downstream 10.0kb downstream 14320 true Chr06: 4192381-4206700 Glycine max
Glyma.06G055400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4196701-4206700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122300872 5265 Fabidae View MSA
124069655 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.60454 0.0 2.63716   Low
cufflinks 3.81159 0.0 12.5775    
cufflinks 5.29888 0.0 16.4596    
cufflinks 4.41852 0.0 14.1326    
cufflinks 8.43573 0.0 28.9058    
cufflinks 6.4998 0.0 22.72    
cufflinks 4.63043 0.0 14.771    
cufflinks 5.35496 0.0 19.1446    
cufflinks 5.50114 0.0 19.6274    
cufflinks 3.404        
cufflinks 2.221        
cufflinks 2.26        
cufflinks 5.522       High
cufflinks 3.579       High
cufflinks 1.597        
cufflinks 1.128        
cufflinks 2.087        
cufflinks 2.011        
cufflinks 1.908        
cufflinks 0.709       Low
cufflinks 3.6       High
cufflinks 0.799       Low
cufflinks 0.654       Low
cufflinks 1.873        
cufflinks 0.955       Low
cufflinks 2.85        

0 Strain