Gene : Glyma.06G061400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32370:SF7 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 Genomic Order:  614
Name:  ? Glyma.06G061400 Secondary Identifier:  ? PAC:30549556
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G061400 0.5kb upstream 0.5kb upstream 5193 true Chr06: 4625574-4630766 Glycine max
Glyma.06G061400 0.5kb upstream 0.5kb upstream 500 false Chr06: 4625574-4626073 Glycine max
Glyma.06G061400 0.5kb downstream 0.5kb downstream 5193 true Chr06: 4626074-4631266 Glycine max
Glyma.06G061400 0.5kb downstream 0.5kb downstream 500 false Chr06: 4630767-4631266 Glycine max
Glyma.06G061400 1.0kb upstream 1.0kb upstream 5693 true Chr06: 4625074-4630766 Glycine max
Glyma.06G061400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 4625074-4626073 Glycine max
Glyma.06G061400 1.0kb downstream 1.0kb downstream 5693 true Chr06: 4626074-4631766 Glycine max
Glyma.06G061400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 4630767-4631766 Glycine max
Glyma.06G061400 2.0kb upstream 2.0kb upstream 6693 true Chr06: 4624074-4630766 Glycine max
Glyma.06G061400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 4624074-4626073 Glycine max
Glyma.06G061400 2.0kb downstream 2.0kb downstream 6693 true Chr06: 4626074-4632766 Glycine max
Glyma.06G061400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 4630767-4632766 Glycine max
Glyma.06G061400 5.0kb upstream 5.0kb upstream 9693 true Chr06: 4621074-4630766 Glycine max
Glyma.06G061400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 4621074-4626073 Glycine max
Glyma.06G061400 5.0kb downstream 5.0kb downstream 9693 true Chr06: 4626074-4635766 Glycine max
Glyma.06G061400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 4630767-4635766 Glycine max
Glyma.06G061400 10.0kb upstream 10.0kb upstream 14693 true Chr06: 4616074-4630766 Glycine max
Glyma.06G061400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 4616074-4626073 Glycine max
Glyma.06G061400 10.0kb downstream 10.0kb downstream 14693 true Chr06: 4626074-4640766 Glycine max
Glyma.06G061400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 4630767-4640766 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253815 5265 Fabidae View MSA
124067835 5270 Rosid View MSA
123737870 5271 Pentapetalae View MSA
122787128 5272 Eudicot View MSA
122043387 5273 Angiosperm View MSA
121310115 5274 Embryophyte View MSA
123347692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0110069 0.0 0.0563463 Low Low
cufflinks 7.28352 0.0 26.2884   High
cufflinks 0.980521 0.0 5.24711    
cufflinks 0.835282 0.0 5.56253    
cufflinks 0.457994 0.0 2.85671    
cufflinks 0.927119 0.0 5.09271    
cufflinks 5.11926 0.0 20.0006   High
cufflinks 1.12569 0.0 5.98437    
cufflinks 0.297878 0.0 1.47767    
cufflinks 0.446        
cufflinks 0.032     Low  
cufflinks 0.371        
cufflinks 0.225        
cufflinks 0.203        
cufflinks 0.014     Low Low
cufflinks 0.209        
cufflinks 0.016     Low Low
cufflinks 0.347        
cufflinks 1.882       High
cufflinks 0.083     Low  
cufflinks 0.029     Low Low
cufflinks 0.106        
cufflinks 0.464        
cufflinks 0.016     Low Low
cufflinks 0.159        
cufflinks 0.074        

0 Strain