Gene : Glyma.06G025000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Genomic Order:  250
Name:  ? Glyma.06G025000 Secondary Identifier:  ? PAC:30551045
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G025000 0.5kb upstream 0.5kb upstream 3990 true Chr06: 1870107-1874096 Glycine max
Glyma.06G025000 0.5kb upstream 0.5kb upstream 500 false Chr06: 1873597-1874096 Glycine max
Glyma.06G025000 0.5kb downstream 0.5kb downstream 3990 true Chr06: 1869607-1873596 Glycine max
Glyma.06G025000 0.5kb downstream 0.5kb downstream 500 false Chr06: 1869607-1870106 Glycine max
Glyma.06G025000 1.0kb upstream 1.0kb upstream 4490 true Chr06: 1870107-1874596 Glycine max
Glyma.06G025000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1873597-1874596 Glycine max
Glyma.06G025000 1.0kb downstream 1.0kb downstream 4490 true Chr06: 1869107-1873596 Glycine max
Glyma.06G025000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1869107-1870106 Glycine max
Glyma.06G025000 2.0kb upstream 2.0kb upstream 5490 true Chr06: 1870107-1875596 Glycine max
Glyma.06G025000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1873597-1875596 Glycine max
Glyma.06G025000 2.0kb downstream 2.0kb downstream 5490 true Chr06: 1868107-1873596 Glycine max
Glyma.06G025000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1868107-1870106 Glycine max
Glyma.06G025000 5.0kb upstream 5.0kb upstream 8490 true Chr06: 1870107-1878596 Glycine max
Glyma.06G025000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1873597-1878596 Glycine max
Glyma.06G025000 5.0kb downstream 5.0kb downstream 8490 true Chr06: 1865107-1873596 Glycine max
Glyma.06G025000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1865107-1870106 Glycine max
Glyma.06G025000 10.0kb upstream 10.0kb upstream 13490 true Chr06: 1870107-1883596 Glycine max
Glyma.06G025000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1873597-1883596 Glycine max
Glyma.06G025000 10.0kb downstream 10.0kb downstream 13490 true Chr06: 1860107-1873596 Glycine max
Glyma.06G025000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1860107-1870106 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311541 5265 Fabidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37401 0.0 17.5781    
cufflinks 3.13924 0.0 11.3303   Low
cufflinks 3.92058 0.0 12.881    
cufflinks 4.02579 0.0 16.5601    
cufflinks 3.83695 0.0 16.7245    
cufflinks 4.06957 0.0 16.9138    
cufflinks 3.29378 0.0 14.6565    
cufflinks 7.73935 0.0 34.8699   High
cufflinks 4.8974 0.0 23.3097    
cufflinks 0.457        
cufflinks 0.413       Low
cufflinks 0.457        
cufflinks 0.41       Low
cufflinks 0.384       Low
cufflinks 0.486        
cufflinks 0.498        
cufflinks 0.536        
cufflinks 0.491        
cufflinks 0.478        
cufflinks 0.657       High
cufflinks 0.399       Low
cufflinks 0.666       High
cufflinks 0.585        
cufflinks 0.593       High
cufflinks 0.61       High
cufflinks 0.439        

0 Strain