Gene : Glyma.06G006000 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  60
Name:  ? Glyma.06G006000 Secondary Identifier:  ? PAC:30552795
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G006000 0.5kb upstream 0.5kb upstream 1319 true Chr06: 490025-491343 Glycine max
Glyma.06G006000 0.5kb upstream 0.5kb upstream 500 false Chr06: 490025-490524 Glycine max
Glyma.06G006000 0.5kb downstream 0.5kb downstream 1319 true Chr06: 490525-491843 Glycine max
Glyma.06G006000 0.5kb downstream 0.5kb downstream 500 false Chr06: 491344-491843 Glycine max
Glyma.06G006000 1.0kb upstream 1.0kb upstream 1819 true Chr06: 489525-491343 Glycine max
Glyma.06G006000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 489525-490524 Glycine max
Glyma.06G006000 1.0kb downstream 1.0kb downstream 1819 true Chr06: 490525-492343 Glycine max
Glyma.06G006000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 491344-492343 Glycine max
Glyma.06G006000 2.0kb upstream 2.0kb upstream 2819 true Chr06: 488525-491343 Glycine max
Glyma.06G006000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 488525-490524 Glycine max
Glyma.06G006000 2.0kb downstream 2.0kb downstream 2819 true Chr06: 490525-493343 Glycine max
Glyma.06G006000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 491344-493343 Glycine max
Glyma.06G006000 5.0kb upstream 5.0kb upstream 5819 true Chr06: 485525-491343 Glycine max
Glyma.06G006000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 485525-490524 Glycine max
Glyma.06G006000 5.0kb downstream 5.0kb downstream 5819 true Chr06: 490525-496343 Glycine max
Glyma.06G006000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 491344-496343 Glycine max
Glyma.06G006000 10.0kb upstream 10.0kb upstream 10819 true Chr06: 480525-491343 Glycine max
Glyma.06G006000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 480525-490524 Glycine max
Glyma.06G006000 10.0kb downstream 10.0kb downstream 10819 true Chr06: 490525-501343 Glycine max
Glyma.06G006000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 491344-501343 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313902 5265 Fabidae View MSA
124073380 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.113758 0.0 0.470861 Low  
cufflinks 0.106868 0.0 0.443162 Low  
cufflinks 0.185546 0.0 0.747827 Low  
cufflinks 0.0403916 0.0 0.181247 Low Low
cufflinks 1.09637 0.0 4.11981   High
cufflinks 0.281317 0.0 1.11726 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.108534 0.0 0.449466 Low  
cufflinks 0.184213 0.0 0.742907 Low  
cufflinks 0.258        
cufflinks 0.948        
cufflinks 0.198        
cufflinks 0.057     Low Low
cufflinks 1.107        
cufflinks 0.34        
cufflinks 0.572        
cufflinks 0.451        
cufflinks 0.197        
cufflinks 0.104       Low
cufflinks 1.175        
cufflinks 7.295     High High
cufflinks 0.584        
cufflinks 0.106       Low
cufflinks 0.443        
cufflinks 0.54        
cufflinks 5.027       High

0 Strain