Gene : Glyma.06G016700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Genomic Order:  167
Name:  ? Glyma.06G016700 Secondary Identifier:  ? PAC:30553813
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G016700 0.5kb upstream 0.5kb upstream 11377 true Chr06: 1231469-1242845 Glycine max
Glyma.06G016700 0.5kb upstream 0.5kb upstream 500 false Chr06: 1242346-1242845 Glycine max
Glyma.06G016700 0.5kb downstream 0.5kb downstream 11377 true Chr06: 1230969-1242345 Glycine max
Glyma.06G016700 0.5kb downstream 0.5kb downstream 500 false Chr06: 1230969-1231468 Glycine max
Glyma.06G016700 1.0kb upstream 1.0kb upstream 11877 true Chr06: 1231469-1243345 Glycine max
Glyma.06G016700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1242346-1243345 Glycine max
Glyma.06G016700 1.0kb downstream 1.0kb downstream 11877 true Chr06: 1230469-1242345 Glycine max
Glyma.06G016700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1230469-1231468 Glycine max
Glyma.06G016700 2.0kb upstream 2.0kb upstream 12877 true Chr06: 1231469-1244345 Glycine max
Glyma.06G016700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1242346-1244345 Glycine max
Glyma.06G016700 2.0kb downstream 2.0kb downstream 12877 true Chr06: 1229469-1242345 Glycine max
Glyma.06G016700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1229469-1231468 Glycine max
Glyma.06G016700 5.0kb upstream 5.0kb upstream 15877 true Chr06: 1231469-1247345 Glycine max
Glyma.06G016700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1242346-1247345 Glycine max
Glyma.06G016700 5.0kb downstream 5.0kb downstream 15877 true Chr06: 1226469-1242345 Glycine max
Glyma.06G016700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1226469-1231468 Glycine max
Glyma.06G016700 10.0kb upstream 10.0kb upstream 20877 true Chr06: 1231469-1252345 Glycine max
Glyma.06G016700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1242346-1252345 Glycine max
Glyma.06G016700 10.0kb downstream 10.0kb downstream 20877 true Chr06: 1221469-1242345 Glycine max
Glyma.06G016700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1221469-1231468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303982 5265 Fabidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6449 0.0 42.5945   Low
cufflinks 13.2253 0.0 41.045   Low
cufflinks 17.43 0.0 56.9188    
cufflinks 21.195 0.0 72.3387 High High
cufflinks 17.7349 0.0 58.1493    
cufflinks 15.4678 0.0 49.2288    
cufflinks 16.9488 0.0 54.8546    
cufflinks 20.1904 0.0 68.2142   High
cufflinks 15.5785 0.0 49.7227    
cufflinks 8.144     High High
cufflinks 6.222     High  
cufflinks 6.536        
cufflinks 8.632     High High
cufflinks 8.616     High High
cufflinks 4.623       Low
cufflinks 6.048        
cufflinks 5.504        
cufflinks 7.117        
cufflinks 6.801        
cufflinks 5.42        
cufflinks 6.934     High  
cufflinks 6.082        
cufflinks 5.106       Low
cufflinks 7.074     High  
cufflinks 5.449        
cufflinks 6.23        

0 Strain