Gene : Glyma.06G013100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10261 - COATOMER SUBUNIT GAMMA Genomic Order:  131
Name:  ? Glyma.06G013100 Secondary Identifier:  ? PAC:30549195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G013100 0.5kb upstream 0.5kb upstream 7521 true Chr06: 975674-983194 Glycine max
Glyma.06G013100 0.5kb upstream 0.5kb upstream 500 false Chr06: 982695-983194 Glycine max
Glyma.06G013100 0.5kb downstream 0.5kb downstream 7521 true Chr06: 975174-982694 Glycine max
Glyma.06G013100 0.5kb downstream 0.5kb downstream 500 false Chr06: 975174-975673 Glycine max
Glyma.06G013100 1.0kb upstream 1.0kb upstream 8021 true Chr06: 975674-983694 Glycine max
Glyma.06G013100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 982695-983694 Glycine max
Glyma.06G013100 1.0kb downstream 1.0kb downstream 8021 true Chr06: 974674-982694 Glycine max
Glyma.06G013100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 974674-975673 Glycine max
Glyma.06G013100 2.0kb upstream 2.0kb upstream 9021 true Chr06: 975674-984694 Glycine max
Glyma.06G013100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 982695-984694 Glycine max
Glyma.06G013100 2.0kb downstream 2.0kb downstream 9021 true Chr06: 973674-982694 Glycine max
Glyma.06G013100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 973674-975673 Glycine max
Glyma.06G013100 5.0kb upstream 5.0kb upstream 12021 true Chr06: 975674-987694 Glycine max
Glyma.06G013100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 982695-987694 Glycine max
Glyma.06G013100 5.0kb downstream 5.0kb downstream 12021 true Chr06: 970674-982694 Glycine max
Glyma.06G013100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 970674-975673 Glycine max
Glyma.06G013100 10.0kb upstream 10.0kb upstream 17021 true Chr06: 975674-992694 Glycine max
Glyma.06G013100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 982695-992694 Glycine max
Glyma.06G013100 10.0kb downstream 10.0kb downstream 17021 true Chr06: 965674-982694 Glycine max
Glyma.06G013100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 965674-975673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3755 0.0 27.6902   Low
cufflinks 15.6712 0.0 42.3533    
cufflinks 10.1587 0.0 27.1144   Low
cufflinks 18.1458 0.0 49.515    
cufflinks 33.4067 0.0 97.0281 High High
cufflinks 23.9141 0.0 66.8641 High  
cufflinks 20.6052 0.0 56.6892    
cufflinks 20.9316 0.0 57.7889    
cufflinks 22.3543 0.0 62.0483 High  
cufflinks 15.893     High  
cufflinks 3.264       Low
cufflinks 8.174     High  
cufflinks 26.368     High High
cufflinks 30.535     High High
cufflinks 2.673       Low
cufflinks 8.08     High  
cufflinks 8.815     High  
cufflinks 13.099     High  
cufflinks 11.515     High  
cufflinks 6.14        
cufflinks 7.362     High  
cufflinks 6.884        
cufflinks 9.986     High  
cufflinks 4.567        
cufflinks 6.402        
cufflinks 8.705     High  

0 Strain