Gene : Glyma.05G221100 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00289//PF02785//PF13535 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // ATP-grasp domain (ATP-grasp_4) Genomic Order:  2211
Name:  ? Glyma.05G221100 Secondary Identifier:  ? PAC:30527117
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1264 Glycine max pathologic  
Gmax PWY-4381 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G221100 0.5kb upstream 0.5kb upstream 8755 true Chr05: 40049855-40058609 Glycine max
Glyma.05G221100 0.5kb upstream 0.5kb upstream 500 false Chr05: 40058110-40058609 Glycine max
Glyma.05G221100 0.5kb downstream 0.5kb downstream 8755 true Chr05: 40049355-40058109 Glycine max
Glyma.05G221100 0.5kb downstream 0.5kb downstream 500 false Chr05: 40049355-40049854 Glycine max
Glyma.05G221100 1.0kb upstream 1.0kb upstream 9255 true Chr05: 40049855-40059109 Glycine max
Glyma.05G221100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40058110-40059109 Glycine max
Glyma.05G221100 1.0kb downstream 1.0kb downstream 9255 true Chr05: 40048855-40058109 Glycine max
Glyma.05G221100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40048855-40049854 Glycine max
Glyma.05G221100 2.0kb upstream 2.0kb upstream 10255 true Chr05: 40049855-40060109 Glycine max
Glyma.05G221100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40058110-40060109 Glycine max
Glyma.05G221100 2.0kb downstream 2.0kb downstream 10255 true Chr05: 40047855-40058109 Glycine max
Glyma.05G221100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40047855-40049854 Glycine max
Glyma.05G221100 5.0kb upstream 5.0kb upstream 13255 true Chr05: 40049855-40063109 Glycine max
Glyma.05G221100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40058110-40063109 Glycine max
Glyma.05G221100 5.0kb downstream 5.0kb downstream 13255 true Chr05: 40044855-40058109 Glycine max
Glyma.05G221100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40044855-40049854 Glycine max
Glyma.05G221100 10.0kb upstream 10.0kb upstream 18255 true Chr05: 40049855-40068109 Glycine max
Glyma.05G221100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40058110-40068109 Glycine max
Glyma.05G221100 10.0kb downstream 10.0kb downstream 18255 true Chr05: 40039855-40058109 Glycine max
Glyma.05G221100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40039855-40049854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303973 5265 Fabidae View MSA
124069238 5270 Rosid View MSA
123745684 5271 Pentapetalae View MSA
122794668 5272 Eudicot View MSA
122048347 5273 Angiosperm View MSA
121348356 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3725 0.0 101.284 High  
cufflinks 28.9001 0.0 78.8788 High  
cufflinks 9.39057 0.0 25.3206   Low
cufflinks 22.4562 0.0 60.4225 High  
cufflinks 37.1056 0.0 103.573 High  
cufflinks 26.5293 0.0 72.0283 High  
cufflinks 57.6018 0.0 169.715 High High
cufflinks 17.7973 0.0 47.5561    
cufflinks 23.4506 0.0 63.2458 High  
cufflinks 5.677        
cufflinks 1.325       Low
cufflinks 3.143        
cufflinks 9.22     High High
cufflinks 13.617     High High
cufflinks 0.895       Low
cufflinks 7.185     High  
cufflinks 2.738        
cufflinks 6.303        
cufflinks 7.752     High  
cufflinks 5.647        
cufflinks 2.439        
cufflinks 5.923        
cufflinks 7.374        
cufflinks 1.841       Low
cufflinks 6.395        
cufflinks 2.279        

0 Strain