Gene : Glyma.05G227000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31811:SF0 - TRNA A64-2'-O-RIBOSYLPHOSPHATE TRANSFERASE Genomic Order:  2270
Name:  ? Glyma.05G227000 Secondary Identifier:  ? PAC:30526572
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G227000 0.5kb upstream 0.5kb upstream 5786 true Chr05: 40519521-40525306 Glycine max
Glyma.05G227000 0.5kb upstream 0.5kb upstream 500 false Chr05: 40519521-40520020 Glycine max
Glyma.05G227000 0.5kb downstream 0.5kb downstream 5786 true Chr05: 40520021-40525806 Glycine max
Glyma.05G227000 0.5kb downstream 0.5kb downstream 500 false Chr05: 40525307-40525806 Glycine max
Glyma.05G227000 1.0kb upstream 1.0kb upstream 6286 true Chr05: 40519021-40525306 Glycine max
Glyma.05G227000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40519021-40520020 Glycine max
Glyma.05G227000 1.0kb downstream 1.0kb downstream 6286 true Chr05: 40520021-40526306 Glycine max
Glyma.05G227000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40525307-40526306 Glycine max
Glyma.05G227000 2.0kb upstream 2.0kb upstream 7286 true Chr05: 40518021-40525306 Glycine max
Glyma.05G227000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40518021-40520020 Glycine max
Glyma.05G227000 2.0kb downstream 2.0kb downstream 7286 true Chr05: 40520021-40527306 Glycine max
Glyma.05G227000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40525307-40527306 Glycine max
Glyma.05G227000 5.0kb upstream 5.0kb upstream 10286 true Chr05: 40515021-40525306 Glycine max
Glyma.05G227000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40515021-40520020 Glycine max
Glyma.05G227000 5.0kb downstream 5.0kb downstream 10286 true Chr05: 40520021-40530306 Glycine max
Glyma.05G227000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40525307-40530306 Glycine max
Glyma.05G227000 10.0kb upstream 10.0kb upstream 15286 true Chr05: 40510021-40525306 Glycine max
Glyma.05G227000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40510021-40520020 Glycine max
Glyma.05G227000 10.0kb downstream 10.0kb downstream 15286 true Chr05: 40520021-40535306 Glycine max
Glyma.05G227000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40525307-40535306 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305678 5265 Fabidae View MSA
124064987 5270 Rosid View MSA
123736577 5271 Pentapetalae View MSA
122790906 5272 Eudicot View MSA
122043011 5273 Angiosperm View MSA
121346582 5274 Embryophyte View MSA
123424647 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4629 0.0 54.9108   High
cufflinks 8.95635 0.0 35.2915    
cufflinks 14.1448 0.0 48.6324   High
cufflinks 11.5057 0.0 44.1128    
cufflinks 11.4421 0.0 39.5225    
cufflinks 7.9548 0.0 31.8476   Low
cufflinks 10.3423 0.0 36.1339    
cufflinks 13.6056 0.0 51.653    
cufflinks 8.7908 0.0 34.6534   Low
cufflinks 1.328        
cufflinks 0.329       Low
cufflinks 1.54        
cufflinks 1.609        
cufflinks 1.917       High
cufflinks 0.543       Low
cufflinks 1.046        
cufflinks 0.646        
cufflinks 1.653       High
cufflinks 1.594        
cufflinks 0.936        
cufflinks 0.463       Low
cufflinks 1.134        
cufflinks 1.329        
cufflinks 0.48       Low
cufflinks 0.994        
cufflinks 0.713        

0 Strain