Gene : Glyma.05G207300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31500:SF9 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2073
Name:  ? Glyma.05G207300 Secondary Identifier:  ? PAC:30526322
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G207300 0.5kb upstream 0.5kb upstream 4215 true Chr05: 38947662-38951876 Glycine max
Glyma.05G207300 0.5kb upstream 0.5kb upstream 500 false Chr05: 38951377-38951876 Glycine max
Glyma.05G207300 0.5kb downstream 0.5kb downstream 4215 true Chr05: 38947162-38951376 Glycine max
Glyma.05G207300 0.5kb downstream 0.5kb downstream 500 false Chr05: 38947162-38947661 Glycine max
Glyma.05G207300 1.0kb upstream 1.0kb upstream 4715 true Chr05: 38947662-38952376 Glycine max
Glyma.05G207300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38951377-38952376 Glycine max
Glyma.05G207300 1.0kb downstream 1.0kb downstream 4715 true Chr05: 38946662-38951376 Glycine max
Glyma.05G207300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38946662-38947661 Glycine max
Glyma.05G207300 2.0kb upstream 2.0kb upstream 5715 true Chr05: 38947662-38953376 Glycine max
Glyma.05G207300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38951377-38953376 Glycine max
Glyma.05G207300 2.0kb downstream 2.0kb downstream 5715 true Chr05: 38945662-38951376 Glycine max
Glyma.05G207300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38945662-38947661 Glycine max
Glyma.05G207300 5.0kb upstream 5.0kb upstream 8715 true Chr05: 38947662-38956376 Glycine max
Glyma.05G207300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38951377-38956376 Glycine max
Glyma.05G207300 5.0kb downstream 5.0kb downstream 8715 true Chr05: 38942662-38951376 Glycine max
Glyma.05G207300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38942662-38947661 Glycine max
Glyma.05G207300 10.0kb upstream 10.0kb upstream 13715 true Chr05: 38947662-38961376 Glycine max
Glyma.05G207300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38951377-38961376 Glycine max
Glyma.05G207300 10.0kb downstream 10.0kb downstream 13715 true Chr05: 38937662-38951376 Glycine max
Glyma.05G207300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38937662-38947661 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122313291 5265 Fabidae View MSA
124069510 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26951 0.0 9.83102    
cufflinks 7.977 0.0 21.774   High
cufflinks 2.425 0.0 7.58878   Low
cufflinks 7.89185 0.0 21.5367   High
cufflinks 5.02727 0.0 14.2923    
cufflinks 2.38567 0.0 7.47863   Low
cufflinks 2.85463 0.0 8.73037    
cufflinks 4.5271 0.0 13.0183    
cufflinks 4.27914 0.0 12.3955    
cufflinks 3.037        
cufflinks 0.192       Low
cufflinks 3.227        
cufflinks 2.4        
cufflinks 2.712        
cufflinks 0.433       Low
cufflinks 2.274        
cufflinks 0.633        
cufflinks 4.165       High
cufflinks 6.422       High
cufflinks 2.035        
cufflinks 0.281       Low
cufflinks 2.529        
cufflinks 3.111        
cufflinks 0.3       Low
cufflinks 2.12        
cufflinks 0.63        

0 Strain