Gene : Glyma.05G194400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION Genomic Order:  1944
Name:  ? Glyma.05G194400 Secondary Identifier:  ? PAC:30526737
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G194400 0.5kb upstream 0.5kb upstream 7194 true Chr05: 37891164-37898357 Glycine max
Glyma.05G194400 0.5kb upstream 0.5kb upstream 500 false Chr05: 37891164-37891663 Glycine max
Glyma.05G194400 0.5kb downstream 0.5kb downstream 7194 true Chr05: 37891664-37898857 Glycine max
Glyma.05G194400 0.5kb downstream 0.5kb downstream 500 false Chr05: 37898358-37898857 Glycine max
Glyma.05G194400 1.0kb upstream 1.0kb upstream 7694 true Chr05: 37890664-37898357 Glycine max
Glyma.05G194400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37890664-37891663 Glycine max
Glyma.05G194400 1.0kb downstream 1.0kb downstream 7694 true Chr05: 37891664-37899357 Glycine max
Glyma.05G194400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37898358-37899357 Glycine max
Glyma.05G194400 2.0kb upstream 2.0kb upstream 8694 true Chr05: 37889664-37898357 Glycine max
Glyma.05G194400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37889664-37891663 Glycine max
Glyma.05G194400 2.0kb downstream 2.0kb downstream 8694 true Chr05: 37891664-37900357 Glycine max
Glyma.05G194400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37898358-37900357 Glycine max
Glyma.05G194400 5.0kb upstream 5.0kb upstream 11694 true Chr05: 37886664-37898357 Glycine max
Glyma.05G194400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37886664-37891663 Glycine max
Glyma.05G194400 5.0kb downstream 5.0kb downstream 11694 true Chr05: 37891664-37903357 Glycine max
Glyma.05G194400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37898358-37903357 Glycine max
Glyma.05G194400 10.0kb upstream 10.0kb upstream 16694 true Chr05: 37881664-37898357 Glycine max
Glyma.05G194400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37881664-37891663 Glycine max
Glyma.05G194400 10.0kb downstream 10.0kb downstream 16694 true Chr05: 37891664-37908357 Glycine max
Glyma.05G194400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37898358-37908357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296407 5265 Fabidae View MSA
124035633 5270 Rosid View MSA
123750036 5271 Pentapetalae View MSA
122789173 5272 Eudicot View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09879 0.0 6.55116   Low
cufflinks 53.3291 0.0 214.036 High High
cufflinks 15.5301 0.0 58.942    
cufflinks 13.5613 0.0 48.8597    
cufflinks 6.08786 0.0 25.7646    
cufflinks 9.81516 0.0 35.13    
cufflinks 9.33443 0.0 30.3727    
cufflinks 10.1389 0.0 39.3611    
cufflinks 7.5698 0.0 24.4609    
cufflinks 0.512        
cufflinks 0.061        
cufflinks 2.765       High
cufflinks 0.119        
cufflinks 0.133        
cufflinks 0.094        
cufflinks 0.045     Low  
cufflinks 0.429        
cufflinks 1.449       High
cufflinks 8.989     High High
cufflinks 0.027     Low Low
cufflinks 0.16        
cufflinks 0.036     Low  
cufflinks 0.039     Low  
cufflinks 0.062        
cufflinks 0.044     Low  
cufflinks 0.177        

0 Strain