Gene : Glyma.05G157900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22814:SF107 - F28N24.19 PROTEIN Genomic Order:  1579
Name:  ? Glyma.05G157900 Secondary Identifier:  ? PAC:30526491
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G157900 0.5kb upstream 0.5kb upstream 2458 true Chr05: 35007921-35010378 Glycine max
Glyma.05G157900 0.5kb upstream 0.5kb upstream 500 false Chr05: 35007921-35008420 Glycine max
Glyma.05G157900 0.5kb downstream 0.5kb downstream 2458 true Chr05: 35008421-35010878 Glycine max
Glyma.05G157900 0.5kb downstream 0.5kb downstream 500 false Chr05: 35010379-35010878 Glycine max
Glyma.05G157900 1.0kb upstream 1.0kb upstream 2958 true Chr05: 35007421-35010378 Glycine max
Glyma.05G157900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35007421-35008420 Glycine max
Glyma.05G157900 1.0kb downstream 1.0kb downstream 2958 true Chr05: 35008421-35011378 Glycine max
Glyma.05G157900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35010379-35011378 Glycine max
Glyma.05G157900 2.0kb upstream 2.0kb upstream 3958 true Chr05: 35006421-35010378 Glycine max
Glyma.05G157900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35006421-35008420 Glycine max
Glyma.05G157900 2.0kb downstream 2.0kb downstream 3958 true Chr05: 35008421-35012378 Glycine max
Glyma.05G157900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35010379-35012378 Glycine max
Glyma.05G157900 5.0kb upstream 5.0kb upstream 6958 true Chr05: 35003421-35010378 Glycine max
Glyma.05G157900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35003421-35008420 Glycine max
Glyma.05G157900 5.0kb downstream 5.0kb downstream 6958 true Chr05: 35008421-35015378 Glycine max
Glyma.05G157900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35010379-35015378 Glycine max
Glyma.05G157900 10.0kb upstream 10.0kb upstream 11958 true Chr05: 34998421-35010378 Glycine max
Glyma.05G157900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 34998421-35008420 Glycine max
Glyma.05G157900 10.0kb downstream 10.0kb downstream 11958 true Chr05: 35008421-35020378 Glycine max
Glyma.05G157900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35010379-35020378 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309493 5265 Fabidae View MSA
124070948 5270 Rosid View MSA
123745345 5271 Pentapetalae View MSA
122793505 5272 Eudicot View MSA
122047069 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17601 0.0 4.41796    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.024525 0.0 0.116034 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0679655 0.0 0.293469 Low  
cufflinks 4.26975 0.0 14.7602   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0397238 0.0 0.17967 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.55       High
cufflinks 0.008     Low Low
cufflinks 0.064     Low  
cufflinks 0.009     Low  
cufflinks 0.613       High
cufflinks 0.01     Low  
cufflinks 0.048     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.082        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157        
cufflinks 0.01     Low  
cufflinks 0.133        

0 Strain