Gene : Glyma.05G131200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22850:SF82 - HISTONE-BINDING PROTEIN RBBP7 Genomic Order:  1312
Name:  ? Glyma.05G131200 Secondary Identifier:  ? PAC:30524562
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G131200 0.5kb upstream 0.5kb upstream 4583 true Chr05: 32421116-32425698 Glycine max
Glyma.05G131200 0.5kb upstream 0.5kb upstream 500 false Chr05: 32425199-32425698 Glycine max
Glyma.05G131200 0.5kb downstream 0.5kb downstream 4583 true Chr05: 32420616-32425198 Glycine max
Glyma.05G131200 0.5kb downstream 0.5kb downstream 500 false Chr05: 32420616-32421115 Glycine max
Glyma.05G131200 1.0kb upstream 1.0kb upstream 5083 true Chr05: 32421116-32426198 Glycine max
Glyma.05G131200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 32425199-32426198 Glycine max
Glyma.05G131200 1.0kb downstream 1.0kb downstream 5083 true Chr05: 32420116-32425198 Glycine max
Glyma.05G131200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 32420116-32421115 Glycine max
Glyma.05G131200 2.0kb upstream 2.0kb upstream 6083 true Chr05: 32421116-32427198 Glycine max
Glyma.05G131200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 32425199-32427198 Glycine max
Glyma.05G131200 2.0kb downstream 2.0kb downstream 6083 true Chr05: 32419116-32425198 Glycine max
Glyma.05G131200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 32419116-32421115 Glycine max
Glyma.05G131200 5.0kb upstream 5.0kb upstream 9083 true Chr05: 32421116-32430198 Glycine max
Glyma.05G131200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 32425199-32430198 Glycine max
Glyma.05G131200 5.0kb downstream 5.0kb downstream 9083 true Chr05: 32416116-32425198 Glycine max
Glyma.05G131200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 32416116-32421115 Glycine max
Glyma.05G131200 10.0kb upstream 10.0kb upstream 14083 true Chr05: 32421116-32435198 Glycine max
Glyma.05G131200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 32425199-32435198 Glycine max
Glyma.05G131200 10.0kb downstream 10.0kb downstream 14083 true Chr05: 32411116-32425198 Glycine max
Glyma.05G131200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 32411116-32421115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306386 5265 Fabidae View MSA
124068970 5270 Rosid View MSA
123736700 5271 Pentapetalae View MSA
122793488 5272 Eudicot View MSA
122044836 5273 Angiosperm View MSA
121350438 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3508 0.0 66.7611    
cufflinks 28.3716 0.0 114.333 High  
cufflinks 17.2525 0.0 58.9364    
cufflinks 30.475 0.0 109.533 High  
cufflinks 26.1188 0.0 91.973 High  
cufflinks 11.7042 0.0 40.2033   Low
cufflinks 32.4466 0.0 133.846 High High
cufflinks 22.3223 0.0 87.2346 High  
cufflinks 22.5481 0.0 78.1005 High  
cufflinks 2.689        
cufflinks 0.718       Low
cufflinks 3.42        
cufflinks 3.252        
cufflinks 4.157        
cufflinks 1.73        
cufflinks 2.913        
cufflinks 2.215        
cufflinks 4.26        
cufflinks 5.108       High
cufflinks 3.106        
cufflinks 0.997       Low
cufflinks 3.246        
cufflinks 3.785        
cufflinks 0.704       Low
cufflinks 2.846        
cufflinks 1.507        

0 Strain