Gene : Glyma.05G141400 G. max Wm82.a2.v1
Defline:  (1 of 11) 1.1.3.15 - (S)-2-hydroxy-acid oxidase / Hydroxy-acid oxidase B Genomic Order:  1414
Name:  ? Glyma.05G141400 Secondary Identifier:  ? PAC:30525994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G141400 0.5kb upstream 0.5kb upstream 6480 true Chr05: 33475994-33482473 Glycine max
Glyma.05G141400 0.5kb upstream 0.5kb upstream 500 false Chr05: 33481974-33482473 Glycine max
Glyma.05G141400 0.5kb downstream 0.5kb downstream 6480 true Chr05: 33475494-33481973 Glycine max
Glyma.05G141400 0.5kb downstream 0.5kb downstream 500 false Chr05: 33475494-33475993 Glycine max
Glyma.05G141400 1.0kb upstream 1.0kb upstream 6980 true Chr05: 33475994-33482973 Glycine max
Glyma.05G141400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 33481974-33482973 Glycine max
Glyma.05G141400 1.0kb downstream 1.0kb downstream 6980 true Chr05: 33474994-33481973 Glycine max
Glyma.05G141400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 33474994-33475993 Glycine max
Glyma.05G141400 2.0kb upstream 2.0kb upstream 7980 true Chr05: 33475994-33483973 Glycine max
Glyma.05G141400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 33481974-33483973 Glycine max
Glyma.05G141400 2.0kb downstream 2.0kb downstream 7980 true Chr05: 33473994-33481973 Glycine max
Glyma.05G141400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 33473994-33475993 Glycine max
Glyma.05G141400 5.0kb upstream 5.0kb upstream 10980 true Chr05: 33475994-33486973 Glycine max
Glyma.05G141400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 33481974-33486973 Glycine max
Glyma.05G141400 5.0kb downstream 5.0kb downstream 10980 true Chr05: 33470994-33481973 Glycine max
Glyma.05G141400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 33470994-33475993 Glycine max
Glyma.05G141400 10.0kb upstream 10.0kb upstream 15980 true Chr05: 33475994-33491973 Glycine max
Glyma.05G141400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 33481974-33491973 Glycine max
Glyma.05G141400 10.0kb downstream 10.0kb downstream 15980 true Chr05: 33465994-33481973 Glycine max
Glyma.05G141400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 33465994-33475993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314428 5265 Fabidae View MSA
124071344 5270 Rosid View MSA
123746733 5271 Pentapetalae View MSA
122791103 5272 Eudicot View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.1608 0.0 101.026    
cufflinks 20.1945 0.0 89.3284 High  
cufflinks 30.4411 0.0 140.409 High High
cufflinks 16.4444 0.0 72.4225    
cufflinks 14.3011 0.0 54.3465    
cufflinks 19.8852 0.0 74.5442    
cufflinks 10.7172 0.0 43.1396   Low
cufflinks 19.6011 0.0 73.864    
cufflinks 15.3321 0.0 58.1799    
cufflinks 0.803        
cufflinks 0.779        
cufflinks 1.509       High
cufflinks 0.756        
cufflinks 0.608       Low
cufflinks 0.419       Low
cufflinks 0.903        
cufflinks 0.771        
cufflinks 1.244       High
cufflinks 1.383       High
cufflinks 0.938        
cufflinks 0.648        
cufflinks 1.034        
cufflinks 0.795        
cufflinks 0.992        
cufflinks 0.895        
cufflinks 0.747        

0 Strain