Gene : Glyma.05G109300 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4809 - Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Genomic Order:  1093
Name:  ? Glyma.05G109300 Secondary Identifier:  ? PAC:30523903
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G109300 0.5kb upstream 0.5kb upstream 7114 true Chr05: 28984650-28991763 Glycine max
Glyma.05G109300 0.5kb upstream 0.5kb upstream 500 false Chr05: 28991264-28991763 Glycine max
Glyma.05G109300 0.5kb downstream 0.5kb downstream 7114 true Chr05: 28984150-28991263 Glycine max
Glyma.05G109300 0.5kb downstream 0.5kb downstream 500 false Chr05: 28984150-28984649 Glycine max
Glyma.05G109300 1.0kb upstream 1.0kb upstream 7614 true Chr05: 28984650-28992263 Glycine max
Glyma.05G109300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 28991264-28992263 Glycine max
Glyma.05G109300 1.0kb downstream 1.0kb downstream 7614 true Chr05: 28983650-28991263 Glycine max
Glyma.05G109300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 28983650-28984649 Glycine max
Glyma.05G109300 2.0kb upstream 2.0kb upstream 8614 true Chr05: 28984650-28993263 Glycine max
Glyma.05G109300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 28991264-28993263 Glycine max
Glyma.05G109300 2.0kb downstream 2.0kb downstream 8614 true Chr05: 28982650-28991263 Glycine max
Glyma.05G109300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 28982650-28984649 Glycine max
Glyma.05G109300 5.0kb upstream 5.0kb upstream 11614 true Chr05: 28984650-28996263 Glycine max
Glyma.05G109300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 28991264-28996263 Glycine max
Glyma.05G109300 5.0kb downstream 5.0kb downstream 11614 true Chr05: 28979650-28991263 Glycine max
Glyma.05G109300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 28979650-28984649 Glycine max
Glyma.05G109300 10.0kb upstream 10.0kb upstream 16614 true Chr05: 28984650-29001263 Glycine max
Glyma.05G109300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 28991264-29001263 Glycine max
Glyma.05G109300 10.0kb downstream 10.0kb downstream 16614 true Chr05: 28974650-28991263 Glycine max
Glyma.05G109300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 28974650-28984649 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306162 5265 Fabidae View MSA
124068788 5270 Rosid View MSA
123740792 5271 Pentapetalae View MSA
122790412 5272 Eudicot View MSA
122047030 5273 Angiosperm View MSA
121346070 5274 Embryophyte View MSA
123380319 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.38172 0.0 25.2817   High
cufflinks 9.03273 0.0 24.3085   High
cufflinks 7.95981 0.0 21.3404    
cufflinks 7.5413 0.0 20.1845    
cufflinks 6.53976 0.0 17.4519   Low
cufflinks 7.87573 0.0 21.0844    
cufflinks 7.56861 0.0 20.2328    
cufflinks 7.58748 0.0 20.307    
cufflinks 7.15718 0.0 19.1224    
cufflinks 9.255     High  
cufflinks 4.118       Low
cufflinks 8.841     High  
cufflinks 9.866     High  
cufflinks 8.684     High  
cufflinks 6.408     High  
cufflinks 9.135     High  
cufflinks 4.655       Low
cufflinks 9.616     High  
cufflinks 10.658     High High
cufflinks 9.099     High  
cufflinks 6.43     High  
cufflinks 9.863     High  
cufflinks 9.593     High  
cufflinks 5.963        
cufflinks 9.36     High  
cufflinks 6.877     High  

0 Strain