Gene : Glyma.05G112100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  1121
Name:  ? Glyma.05G112100 Secondary Identifier:  ? PAC:30527124
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G112100 0.5kb upstream 0.5kb upstream 7946 true Chr05: 29767571-29775516 Glycine max
Glyma.05G112100 0.5kb upstream 0.5kb upstream 500 false Chr05: 29767571-29768070 Glycine max
Glyma.05G112100 0.5kb downstream 0.5kb downstream 7946 true Chr05: 29768071-29776016 Glycine max
Glyma.05G112100 0.5kb downstream 0.5kb downstream 500 false Chr05: 29775517-29776016 Glycine max
Glyma.05G112100 1.0kb upstream 1.0kb upstream 8446 true Chr05: 29767071-29775516 Glycine max
Glyma.05G112100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29767071-29768070 Glycine max
Glyma.05G112100 1.0kb downstream 1.0kb downstream 8446 true Chr05: 29768071-29776516 Glycine max
Glyma.05G112100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29775517-29776516 Glycine max
Glyma.05G112100 2.0kb upstream 2.0kb upstream 9446 true Chr05: 29766071-29775516 Glycine max
Glyma.05G112100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29766071-29768070 Glycine max
Glyma.05G112100 2.0kb downstream 2.0kb downstream 9446 true Chr05: 29768071-29777516 Glycine max
Glyma.05G112100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29775517-29777516 Glycine max
Glyma.05G112100 5.0kb upstream 5.0kb upstream 12446 true Chr05: 29763071-29775516 Glycine max
Glyma.05G112100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29763071-29768070 Glycine max
Glyma.05G112100 5.0kb downstream 5.0kb downstream 12446 true Chr05: 29768071-29780516 Glycine max
Glyma.05G112100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29775517-29780516 Glycine max
Glyma.05G112100 10.0kb upstream 10.0kb upstream 17446 true Chr05: 29758071-29775516 Glycine max
Glyma.05G112100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29758071-29768070 Glycine max
Glyma.05G112100 10.0kb downstream 10.0kb downstream 17446 true Chr05: 29768071-29785516 Glycine max
Glyma.05G112100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29775517-29785516 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306518 5265 Fabidae View MSA
124062702 5270 Rosid View MSA
123739911 5271 Pentapetalae View MSA
122791268 5272 Eudicot View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.6814 0.0 236.806 High High
cufflinks 38.5839 0.0 132.297 High High
cufflinks 18.8107 0.0 89.8805    
cufflinks 21.0859 0.0 78.6235 High  
cufflinks 13.8729 0.0 72.3297    
cufflinks 11.7411 0.0 48.988   Low
cufflinks 30.8402 0.0 130.6 High  
cufflinks 21.5303 0.0 78.164 High  
cufflinks 11.7302 0.0 65.7481   Low
cufflinks 0.499        
cufflinks 0.157        
cufflinks 0.409        
cufflinks 0.091     Low Low
cufflinks 0.079       Low
cufflinks 0.369        
cufflinks 1.458       High
cufflinks 0.13        
cufflinks 0.501        
cufflinks 0.667        
cufflinks 1.482       High
cufflinks 0.158        
cufflinks 1.294       High
cufflinks 1.084       High
cufflinks 0.141        
cufflinks 1.501       High
cufflinks 0.128       Low

0 Strain