Gene : Glyma.05G073100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10836:SF53 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC2, CYTOSOLIC Genomic Order:  731
Name:  ? Glyma.05G073100 Secondary Identifier:  ? PAC:30527004
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G073100 0.5kb upstream 0.5kb upstream 4516 true Chr05: 8115356-8119871 Glycine max
Glyma.05G073100 0.5kb upstream 0.5kb upstream 500 false Chr05: 8119372-8119871 Glycine max
Glyma.05G073100 0.5kb downstream 0.5kb downstream 4516 true Chr05: 8114856-8119371 Glycine max
Glyma.05G073100 0.5kb downstream 0.5kb downstream 500 false Chr05: 8114856-8115355 Glycine max
Glyma.05G073100 1.0kb upstream 1.0kb upstream 5016 true Chr05: 8115356-8120371 Glycine max
Glyma.05G073100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8119372-8120371 Glycine max
Glyma.05G073100 1.0kb downstream 1.0kb downstream 5016 true Chr05: 8114356-8119371 Glycine max
Glyma.05G073100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8114356-8115355 Glycine max
Glyma.05G073100 2.0kb upstream 2.0kb upstream 6016 true Chr05: 8115356-8121371 Glycine max
Glyma.05G073100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8119372-8121371 Glycine max
Glyma.05G073100 2.0kb downstream 2.0kb downstream 6016 true Chr05: 8113356-8119371 Glycine max
Glyma.05G073100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8113356-8115355 Glycine max
Glyma.05G073100 5.0kb upstream 5.0kb upstream 9016 true Chr05: 8115356-8124371 Glycine max
Glyma.05G073100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8119372-8124371 Glycine max
Glyma.05G073100 5.0kb downstream 5.0kb downstream 9016 true Chr05: 8110356-8119371 Glycine max
Glyma.05G073100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8110356-8115355 Glycine max
Glyma.05G073100 10.0kb upstream 10.0kb upstream 14016 true Chr05: 8115356-8129371 Glycine max
Glyma.05G073100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8119372-8129371 Glycine max
Glyma.05G073100 10.0kb downstream 10.0kb downstream 14016 true Chr05: 8105356-8119371 Glycine max
Glyma.05G073100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8105356-8115355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779529 5273 Angiosperm View MSA
122298471 5265 Fabidae View MSA
124036479 5270 Rosid View MSA
123743189 5271 Pentapetalae View MSA
122770554 5272 Eudicot View MSA
121051183 5274 Embryophyte View MSA
123091284 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.233909 0.0 0.907381    
cufflinks 0.0811768 0.0 0.32777 Low  
cufflinks 0.722843 0.0 2.65711   High
cufflinks 0.206929 0.0 0.806388    
cufflinks 0.51342 0.0 1.92422   High
cufflinks 0.179162 0.0 0.702154 Low  
cufflinks 0.146842 0.0 0.579852 Low  
cufflinks 0.17927 0.0 0.70228 Low  
cufflinks 0.0332426 0.0 0.141675 Low Low
cufflinks 0.033     Low  
cufflinks 0.014     Low  
cufflinks 2.998       High
cufflinks 0.144        
cufflinks 0.274        
cufflinks 0.019     Low  
cufflinks 0.024     Low  
cufflinks 0.019     Low  
cufflinks 14.494     High High
cufflinks 0.027     Low  
cufflinks 0.018     Low  
cufflinks 0.034     Low  
cufflinks 0.02     Low  
cufflinks 0.032     Low  
cufflinks 0.046     Low  
cufflinks 0.026     Low  
cufflinks 0.113        

0 Strain