Gene : Glyma.05G050700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED Genomic Order:  507
Name:  ? Glyma.05G050700 Secondary Identifier:  ? PAC:30525397
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G050700 0.5kb upstream 0.5kb upstream 8036 true Chr05: 4535291-4543326 Glycine max
Glyma.05G050700 0.5kb upstream 0.5kb upstream 500 false Chr05: 4535291-4535790 Glycine max
Glyma.05G050700 0.5kb downstream 0.5kb downstream 8036 true Chr05: 4535791-4543826 Glycine max
Glyma.05G050700 0.5kb downstream 0.5kb downstream 500 false Chr05: 4543327-4543826 Glycine max
Glyma.05G050700 1.0kb upstream 1.0kb upstream 8536 true Chr05: 4534791-4543326 Glycine max
Glyma.05G050700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4534791-4535790 Glycine max
Glyma.05G050700 1.0kb downstream 1.0kb downstream 8536 true Chr05: 4535791-4544326 Glycine max
Glyma.05G050700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4543327-4544326 Glycine max
Glyma.05G050700 2.0kb upstream 2.0kb upstream 9536 true Chr05: 4533791-4543326 Glycine max
Glyma.05G050700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4533791-4535790 Glycine max
Glyma.05G050700 2.0kb downstream 2.0kb downstream 9536 true Chr05: 4535791-4545326 Glycine max
Glyma.05G050700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4543327-4545326 Glycine max
Glyma.05G050700 5.0kb upstream 5.0kb upstream 12536 true Chr05: 4530791-4543326 Glycine max
Glyma.05G050700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4530791-4535790 Glycine max
Glyma.05G050700 5.0kb downstream 5.0kb downstream 12536 true Chr05: 4535791-4548326 Glycine max
Glyma.05G050700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4543327-4548326 Glycine max
Glyma.05G050700 10.0kb upstream 10.0kb upstream 17536 true Chr05: 4525791-4543326 Glycine max
Glyma.05G050700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4525791-4535790 Glycine max
Glyma.05G050700 10.0kb downstream 10.0kb downstream 17536 true Chr05: 4535791-4553326 Glycine max
Glyma.05G050700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4543327-4553326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311356 5265 Fabidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.18528 0.0 38.0121    
cufflinks 8.60056 0.0 39.065    
cufflinks 0.226984 0.0 1.11862    
cufflinks 0.735251 0.0 4.4584    
cufflinks 2.43842 0.0 13.6305    
cufflinks 2.06597 0.0 12.5513    
cufflinks 0.0300875 0.0 0.135925 Low Low
cufflinks 2.27946 0.0 15.0373    
cufflinks 17.8323 0.0 73.4879   High
cufflinks 0.161        
cufflinks 0.284        
cufflinks 0.01     Low Low
cufflinks 0.427        
cufflinks 0.021     Low Low
cufflinks 0.737        
cufflinks 0.5        
cufflinks 0.511        
cufflinks 0.006     Low Low
cufflinks 0.501        
cufflinks 0.427        
cufflinks 0.495        
cufflinks 0.478        
cufflinks 0.429        
cufflinks 0.298        
cufflinks 0.489        
cufflinks 0.346        

0 Strain