Protein : Cagra.0860s0020.1.p C. grandiflora v1.1
Secondary Identifier:  PAC:28901397 Organism Name:  Capsella grandiflora
Length:  1003   Name:  Cagra.0860s0020.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

9 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR003156 Domain DHHA1 domain
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR023218 Domain UPF0291 structural domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.0860s0020.1_CDS 3012   Scaffold860: 93167-100102 Capsella grandiflora

36 Ontology Annotations

Ontology Term Db Gene/Protein Name
6.1.1.7 ENZYME Cagra.0860s0020.1.p
G3DSA:1.10.287.540 GENE3D Cagra.0860s0020.1.p
GO:0000166 GO Cagra.0860s0020.1.p
IPR002318 InterPro Cagra.0860s0020.1.p
IPR003156 InterPro Cagra.0860s0020.1.p
IPR009000 InterPro Cagra.0860s0020.1.p
IPR012947 InterPro Cagra.0860s0020.1.p
IPR018162 InterPro Cagra.0860s0020.1.p
IPR018163 InterPro Cagra.0860s0020.1.p
IPR018164 InterPro Cagra.0860s0020.1.p
IPR018165 InterPro Cagra.0860s0020.1.p
GO:0003676 GO Cagra.0860s0020.1.p
GO:0004813 GO Cagra.0860s0020.1.p
GO:0005524 GO Cagra.0860s0020.1.p
GO:0005737 GO Cagra.0860s0020.1.p
GO:0006412 GO Cagra.0860s0020.1.p
GO:0006419 GO Cagra.0860s0020.1.p
GO:0016876 GO Cagra.0860s0020.1.p
GO:0043039 GO Cagra.0860s0020.1.p
PF07973 PFAM Cagra.0860s0020.1.p
PR00980 PRINTS Cagra.0860s0020.1.p
PS50860 PROFILE Cagra.0860s0020.1.p
SM00863 SMART Cagra.0860s0020.1.p
SSF101353 SSF Cagra.0860s0020.1.p
SSF50447 SSF Cagra.0860s0020.1.p
SSF55186 SSF Cagra.0860s0020.1.p
SSF55681 SSF Cagra.0860s0020.1.p
IPR023218 InterPro Cagra.0860s0020.1.p
K01872 KEGG Cagra.0860s0020.1.p
ALANINE--TRNA-LIGASE-RXN METACYC Cagra.0860s0020.1.p

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora TRNA-CHARGING-PWY Capsella grandiflora pathologic