Gene : Cagra.0050s0139 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23024:SF209 - CARBOXYLESTERASE 9-RELATED Genomic Order:  139
Name:  ? Cagra.0050s0139 Secondary Identifier:  ? PAC:28917103
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6303 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0050s0139 0.5kb upstream 0.5kb upstream 1300 true Scaffold50: 538852-540151 Capsella grandiflora
Cagra.0050s0139 0.5kb upstream 0.5kb upstream 325 false Scaffold50: 539827-540151 Capsella grandiflora
Cagra.0050s0139 0.5kb downstream 0.5kb downstream 1475 true Scaffold50: 538352-539826 Capsella grandiflora
Cagra.0050s0139 0.5kb downstream 0.5kb downstream 500 false Scaffold50: 538352-538851 Capsella grandiflora
Cagra.0050s0139 1.0kb upstream 1.0kb upstream 1300 true Scaffold50: 538852-540151 Capsella grandiflora
Cagra.0050s0139 1.0kb upstream 1.0kb upstream 325 false Scaffold50: 539827-540151 Capsella grandiflora
Cagra.0050s0139 1.0kb downstream 1.0kb downstream 1975 true Scaffold50: 537852-539826 Capsella grandiflora
Cagra.0050s0139 1.0kb downstream 1.0kb downstream 1000 false Scaffold50: 537852-538851 Capsella grandiflora
Cagra.0050s0139 2.0kb upstream 2.0kb upstream 1300 true Scaffold50: 538852-540151 Capsella grandiflora
Cagra.0050s0139 2.0kb upstream 2.0kb upstream 325 false Scaffold50: 539827-540151 Capsella grandiflora
Cagra.0050s0139 2.0kb downstream 2.0kb downstream 2975 true Scaffold50: 536852-539826 Capsella grandiflora
Cagra.0050s0139 2.0kb downstream 2.0kb downstream 2000 false Scaffold50: 536852-538851 Capsella grandiflora
Cagra.0050s0139 5.0kb upstream 5.0kb upstream 1300 true Scaffold50: 538852-540151 Capsella grandiflora
Cagra.0050s0139 5.0kb upstream 5.0kb upstream 325 false Scaffold50: 539827-540151 Capsella grandiflora
Cagra.0050s0139 5.0kb downstream 5.0kb downstream 5975 true Scaffold50: 533852-539826 Capsella grandiflora
Cagra.0050s0139 5.0kb downstream 5.0kb downstream 5000 false Scaffold50: 533852-538851 Capsella grandiflora
Cagra.0050s0139 10.0kb upstream 10.0kb upstream 1300 true Scaffold50: 538852-540151 Capsella grandiflora
Cagra.0050s0139 10.0kb upstream 10.0kb upstream 325 false Scaffold50: 539827-540151 Capsella grandiflora
Cagra.0050s0139 10.0kb downstream 10.0kb downstream 10975 true Scaffold50: 528852-539826 Capsella grandiflora
Cagra.0050s0139 10.0kb downstream 10.0kb downstream 10000 false Scaffold50: 528852-538851 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040959 5273 Angiosperm View MSA
122375013 5261 Brassicaceae View MSA
123828832 5264 Brassicales-Malvales View MSA
124343255 5266 SBM View MSA
124244838 5268 Malvidae View MSA
124067894 5270 Rosid View MSA
123744138 5271 Pentapetalae View MSA
122796188 5272 Eudicot View MSA
121309778 5274 Embryophyte View MSA
123347440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain