Gene : Cagra.2623s0005 C. grandiflora v1.1
Defline:  (1 of 1) PF01535//PF13041//PF13176//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Tetratricopeptide repeat (TPR_7) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  5
Name:  ? Cagra.2623s0005 Secondary Identifier:  ? PAC:28909655
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2623s0005 0.5kb upstream 0.5kb upstream 2639 true Scaffold2623: 14567-17205 Capsella grandiflora
Cagra.2623s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2623: 14567-15066 Capsella grandiflora
Cagra.2623s0005 0.5kb downstream 0.5kb downstream 2639 true Scaffold2623: 15067-17705 Capsella grandiflora
Cagra.2623s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2623: 17206-17705 Capsella grandiflora
Cagra.2623s0005 1.0kb upstream 1.0kb upstream 3139 true Scaffold2623: 14067-17205 Capsella grandiflora
Cagra.2623s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2623: 14067-15066 Capsella grandiflora
Cagra.2623s0005 1.0kb downstream 1.0kb downstream 3139 true Scaffold2623: 15067-18205 Capsella grandiflora
Cagra.2623s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2623: 17206-18205 Capsella grandiflora
Cagra.2623s0005 2.0kb upstream 2.0kb upstream 4139 true Scaffold2623: 13067-17205 Capsella grandiflora
Cagra.2623s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2623: 13067-15066 Capsella grandiflora
Cagra.2623s0005 2.0kb downstream 2.0kb downstream 4139 true Scaffold2623: 15067-19205 Capsella grandiflora
Cagra.2623s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2623: 17206-19205 Capsella grandiflora
Cagra.2623s0005 5.0kb upstream 5.0kb upstream 7139 true Scaffold2623: 10067-17205 Capsella grandiflora
Cagra.2623s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2623: 10067-15066 Capsella grandiflora
Cagra.2623s0005 5.0kb downstream 5.0kb downstream 7139 true Scaffold2623: 15067-22205 Capsella grandiflora
Cagra.2623s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2623: 17206-22205 Capsella grandiflora
Cagra.2623s0005 10.0kb upstream 10.0kb upstream 12139 true Scaffold2623: 5067-17205 Capsella grandiflora
Cagra.2623s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2623: 5067-15066 Capsella grandiflora
Cagra.2623s0005 10.0kb downstream 10.0kb downstream 12139 true Scaffold2623: 15067-27205 Capsella grandiflora
Cagra.2623s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2623: 17206-27205 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377899 5261 Brassicaceae View MSA
123831431 5264 Brassicales-Malvales View MSA
124341547 5266 SBM View MSA
124249925 5268 Malvidae View MSA
124067194 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain