Protein : Cagra.2342s0005.1.p C. grandiflora v1.1

Secondary Identifier:  PAC:28894360 Organism Name:  Capsella grandiflora
Length:  1404   Name:  Cagra.2342s0005.1.p
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Proteins

6 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012310 Domain DNA ligase, ATP-dependent, central
IPR012308 Domain DNA ligase, ATP-dependent, N-terminal
IPR012309 Domain DNA ligase, ATP-dependent, C-terminal
IPR000977 Family DNA ligase, ATP-dependent
IPR011084 Domain DNA repair metallo-beta-lactamase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.2342s0005.1_CDS 4215   Scaffold2342: 21776-29332 Capsella grandiflora

26 Ontology Annotations

Ontology Term Db Gene/Protein Name
G3DSA:2.40.50.140 GENE3D Cagra.2342s0005.1.p
6.5.1.1 ENZYME Cagra.2342s0005.1.p
GO:0006281 GO Cagra.2342s0005.1.p
GO:0005524 GO Cagra.2342s0005.1.p
GO:0003910 GO Cagra.2342s0005.1.p
GO:0003677 GO Cagra.2342s0005.1.p
IPR000977 InterPro Cagra.2342s0005.1.p
GO:0071897 GO Cagra.2342s0005.1.p
GO:0006310 GO Cagra.2342s0005.1.p
IPR012308 InterPro Cagra.2342s0005.1.p
IPR011084 InterPro Cagra.2342s0005.1.p
PTHR10459 PANTHER Cagra.2342s0005.1.p
IPR012340 InterPro Cagra.2342s0005.1.p
IPR012310 InterPro Cagra.2342s0005.1.p
IPR012309 InterPro Cagra.2342s0005.1.p
PF04679 PFAM Cagra.2342s0005.1.p
PF04675 PFAM Cagra.2342s0005.1.p
PF01068 PFAM Cagra.2342s0005.1.p
PTHR10459:SF38 PANTHER Cagra.2342s0005.1.p
SSF50249 SSF Cagra.2342s0005.1.p
SSF117018 SSF Cagra.2342s0005.1.p
PS50160 PROFILE Cagra.2342s0005.1.p
PF07522 PFAM Cagra.2342s0005.1.p
TIGR00574 TIGRFAMs Cagra.2342s0005.1.p
SSF56281 SSF Cagra.2342s0005.1.p
SSF56091 SSF Cagra.2342s0005.1.p

0 Pathway Components

0 Pathways