Gene : Cagra.21548s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.21548s0002 Secondary Identifier:  ? PAC:28904968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21548s0002 0.5kb upstream 0.5kb upstream 2902 true Scaffold21548: 2342-5243 Capsella grandiflora
Cagra.21548s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold21548: 2342-2841 Capsella grandiflora
Cagra.21548s0002 0.5kb downstream 0.5kb downstream 2902 true Scaffold21548: 2842-5743 Capsella grandiflora
Cagra.21548s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold21548: 5244-5743 Capsella grandiflora
Cagra.21548s0002 1.0kb upstream 1.0kb upstream 3402 true Scaffold21548: 1842-5243 Capsella grandiflora
Cagra.21548s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold21548: 1842-2841 Capsella grandiflora
Cagra.21548s0002 1.0kb downstream 1.0kb downstream 3402 true Scaffold21548: 2842-6243 Capsella grandiflora
Cagra.21548s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold21548: 5244-6243 Capsella grandiflora
Cagra.21548s0002 2.0kb upstream 2.0kb upstream 4402 true Scaffold21548: 842-5243 Capsella grandiflora
Cagra.21548s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold21548: 842-2841 Capsella grandiflora
Cagra.21548s0002 2.0kb downstream 2.0kb downstream 4402 true Scaffold21548: 2842-7243 Capsella grandiflora
Cagra.21548s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold21548: 5244-7243 Capsella grandiflora
Cagra.21548s0002 5.0kb upstream 5.0kb upstream 5243 true Scaffold21548: 1-5243 Capsella grandiflora
Cagra.21548s0002 5.0kb upstream 5.0kb upstream 2841 false Scaffold21548: 1-2841 Capsella grandiflora
Cagra.21548s0002 5.0kb downstream 5.0kb downstream 6612 true Scaffold21548: 2842-9453 Capsella grandiflora
Cagra.21548s0002 5.0kb downstream 5.0kb downstream 4210 false Scaffold21548: 5244-9453 Capsella grandiflora
Cagra.21548s0002 10.0kb upstream 10.0kb upstream 5243 true Scaffold21548: 1-5243 Capsella grandiflora
Cagra.21548s0002 10.0kb upstream 10.0kb upstream 2841 false Scaffold21548: 1-2841 Capsella grandiflora
Cagra.21548s0002 10.0kb downstream 10.0kb downstream 6612 true Scaffold21548: 2842-9453 Capsella grandiflora
Cagra.21548s0002 10.0kb downstream 10.0kb downstream 4210 false Scaffold21548: 5244-9453 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372991 5261 Brassicaceae View MSA
123828248 5264 Brassicales-Malvales View MSA
124343305 5266 SBM View MSA
124240605 5268 Malvidae View MSA
124062749 5270 Rosid View MSA
123737658 5271 Pentapetalae View MSA
122787636 5272 Eudicot View MSA
122044580 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121344995 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain