Gene : Cagra.24333s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24098:SF12 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  1
Name:  ? Cagra.24333s0001 Secondary Identifier:  ? PAC:28907568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.24333s0001 0.5kb upstream 0.5kb upstream 6025 true Scaffold24333: 1193-7217 Capsella grandiflora
Cagra.24333s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold24333: 1193-1692 Capsella grandiflora
Cagra.24333s0001 0.5kb downstream 0.5kb downstream 6025 true Scaffold24333: 1693-7717 Capsella grandiflora
Cagra.24333s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold24333: 7218-7717 Capsella grandiflora
Cagra.24333s0001 1.0kb upstream 1.0kb upstream 6525 true Scaffold24333: 693-7217 Capsella grandiflora
Cagra.24333s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold24333: 693-1692 Capsella grandiflora
Cagra.24333s0001 1.0kb downstream 1.0kb downstream 6525 true Scaffold24333: 1693-8217 Capsella grandiflora
Cagra.24333s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold24333: 7218-8217 Capsella grandiflora
Cagra.24333s0001 2.0kb upstream 2.0kb upstream 7217 true Scaffold24333: 1-7217 Capsella grandiflora
Cagra.24333s0001 2.0kb upstream 2.0kb upstream 1692 false Scaffold24333: 1-1692 Capsella grandiflora
Cagra.24333s0001 2.0kb downstream 2.0kb downstream 7525 true Scaffold24333: 1693-9217 Capsella grandiflora
Cagra.24333s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold24333: 7218-9217 Capsella grandiflora
Cagra.24333s0001 5.0kb upstream 5.0kb upstream 7217 true Scaffold24333: 1-7217 Capsella grandiflora
Cagra.24333s0001 5.0kb upstream 5.0kb upstream 1692 false Scaffold24333: 1-1692 Capsella grandiflora
Cagra.24333s0001 5.0kb downstream 5.0kb downstream 10525 true Scaffold24333: 1693-12217 Capsella grandiflora
Cagra.24333s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold24333: 7218-12217 Capsella grandiflora
Cagra.24333s0001 10.0kb upstream 10.0kb upstream 7217 true Scaffold24333: 1-7217 Capsella grandiflora
Cagra.24333s0001 10.0kb upstream 10.0kb upstream 1692 false Scaffold24333: 1-1692 Capsella grandiflora
Cagra.24333s0001 10.0kb downstream 10.0kb downstream 15525 true Scaffold24333: 1693-17217 Capsella grandiflora
Cagra.24333s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold24333: 7218-17217 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370096 5261 Brassicaceae View MSA
123830080 5264 Brassicales-Malvales View MSA
124343521 5266 SBM View MSA
124243929 5268 Malvidae View MSA
124067394 5270 Rosid View MSA
123737655 5271 Pentapetalae View MSA
122795186 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain