Gene : Cagra.22847s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15245:SF20 - SYMPLEKIN Genomic Order:  3
Name:  ? Cagra.22847s0003 Secondary Identifier:  ? PAC:28919890
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22847s0003 0.5kb upstream 0.5kb upstream 12547 true Scaffold22847: 6522-19068 Capsella grandiflora
Cagra.22847s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold22847: 18569-19068 Capsella grandiflora
Cagra.22847s0003 0.5kb downstream 0.5kb downstream 12547 true Scaffold22847: 6022-18568 Capsella grandiflora
Cagra.22847s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold22847: 6022-6521 Capsella grandiflora
Cagra.22847s0003 1.0kb upstream 1.0kb upstream 13047 true Scaffold22847: 6522-19568 Capsella grandiflora
Cagra.22847s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold22847: 18569-19568 Capsella grandiflora
Cagra.22847s0003 1.0kb downstream 1.0kb downstream 13047 true Scaffold22847: 5522-18568 Capsella grandiflora
Cagra.22847s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold22847: 5522-6521 Capsella grandiflora
Cagra.22847s0003 2.0kb upstream 2.0kb upstream 14047 true Scaffold22847: 6522-20568 Capsella grandiflora
Cagra.22847s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold22847: 18569-20568 Capsella grandiflora
Cagra.22847s0003 2.0kb downstream 2.0kb downstream 14047 true Scaffold22847: 4522-18568 Capsella grandiflora
Cagra.22847s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold22847: 4522-6521 Capsella grandiflora
Cagra.22847s0003 5.0kb upstream 5.0kb upstream 17047 true Scaffold22847: 6522-23568 Capsella grandiflora
Cagra.22847s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold22847: 18569-23568 Capsella grandiflora
Cagra.22847s0003 5.0kb downstream 5.0kb downstream 17047 true Scaffold22847: 1522-18568 Capsella grandiflora
Cagra.22847s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold22847: 1522-6521 Capsella grandiflora
Cagra.22847s0003 10.0kb upstream 10.0kb upstream 19590 true Scaffold22847: 6522-26111 Capsella grandiflora
Cagra.22847s0003 10.0kb upstream 10.0kb upstream 7543 false Scaffold22847: 18569-26111 Capsella grandiflora
Cagra.22847s0003 10.0kb downstream 10.0kb downstream 18568 true Scaffold22847: 1-18568 Capsella grandiflora
Cagra.22847s0003 10.0kb downstream 10.0kb downstream 6521 false Scaffold22847: 1-6521 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369366 5261 Brassicaceae View MSA
123837013 5264 Brassicales-Malvales View MSA
124343067 5266 SBM View MSA
124246771 5268 Malvidae View MSA
124064902 5270 Rosid View MSA
123745431 5271 Pentapetalae View MSA
122791448 5272 Eudicot View MSA
122046301 5273 Angiosperm View MSA
121344612 5274 Embryophyte View MSA
123424208 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain