Gene : Cagra.13316s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10108:SF753 - METHYLTRANSFERASE PMT17-RELATED Genomic Order:  1
Name:  ? Cagra.13316s0001 Secondary Identifier:  ? PAC:28915837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13316s0001 0.5kb upstream 0.5kb upstream 2033 true Scaffold13316: 1-2033 Capsella grandiflora
Cagra.13316s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold13316: 1-2 Capsella grandiflora
Cagra.13316s0001 0.5kb downstream 0.5kb downstream 2531 true Scaffold13316: 3-2533 Capsella grandiflora
Cagra.13316s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13316: 2034-2533 Capsella grandiflora
Cagra.13316s0001 1.0kb upstream 1.0kb upstream 2033 true Scaffold13316: 1-2033 Capsella grandiflora
Cagra.13316s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold13316: 1-2 Capsella grandiflora
Cagra.13316s0001 1.0kb downstream 1.0kb downstream 3031 true Scaffold13316: 3-3033 Capsella grandiflora
Cagra.13316s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13316: 2034-3033 Capsella grandiflora
Cagra.13316s0001 2.0kb upstream 2.0kb upstream 2033 true Scaffold13316: 1-2033 Capsella grandiflora
Cagra.13316s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold13316: 1-2 Capsella grandiflora
Cagra.13316s0001 2.0kb downstream 2.0kb downstream 4031 true Scaffold13316: 3-4033 Capsella grandiflora
Cagra.13316s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13316: 2034-4033 Capsella grandiflora
Cagra.13316s0001 5.0kb upstream 5.0kb upstream 2033 true Scaffold13316: 1-2033 Capsella grandiflora
Cagra.13316s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold13316: 1-2 Capsella grandiflora
Cagra.13316s0001 5.0kb downstream 5.0kb downstream 7031 true Scaffold13316: 3-7033 Capsella grandiflora
Cagra.13316s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold13316: 2034-7033 Capsella grandiflora
Cagra.13316s0001 10.0kb upstream 10.0kb upstream 2033 true Scaffold13316: 1-2033 Capsella grandiflora
Cagra.13316s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold13316: 1-2 Capsella grandiflora
Cagra.13316s0001 10.0kb downstream 10.0kb downstream 12031 true Scaffold13316: 3-12033 Capsella grandiflora
Cagra.13316s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold13316: 2034-12033 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380140 5261 Brassicaceae View MSA
123837976 5264 Brassicales-Malvales View MSA
124339615 5266 SBM View MSA
124240259 5268 Malvidae View MSA
124063763 5270 Rosid View MSA
123736369 5271 Pentapetalae View MSA
122786286 5272 Eudicot View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain