Gene : Cagra.10840s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR35474:SF2 - SERINE-ARGININE-ASPARTATE-RICH PROTEIN SHW1 Genomic Order:  2
Name:  ? Cagra.10840s0002 Secondary Identifier:  ? PAC:28903635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10840s0002 0.5kb upstream 0.5kb upstream 1721 true Scaffold10840: 3243-4963 Capsella grandiflora
Cagra.10840s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold10840: 4464-4963 Capsella grandiflora
Cagra.10840s0002 0.5kb downstream 0.5kb downstream 1721 true Scaffold10840: 2743-4463 Capsella grandiflora
Cagra.10840s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold10840: 2743-3242 Capsella grandiflora
Cagra.10840s0002 1.0kb upstream 1.0kb upstream 2221 true Scaffold10840: 3243-5463 Capsella grandiflora
Cagra.10840s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold10840: 4464-5463 Capsella grandiflora
Cagra.10840s0002 1.0kb downstream 1.0kb downstream 2221 true Scaffold10840: 2243-4463 Capsella grandiflora
Cagra.10840s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold10840: 2243-3242 Capsella grandiflora
Cagra.10840s0002 2.0kb upstream 2.0kb upstream 3221 true Scaffold10840: 3243-6463 Capsella grandiflora
Cagra.10840s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold10840: 4464-6463 Capsella grandiflora
Cagra.10840s0002 2.0kb downstream 2.0kb downstream 3221 true Scaffold10840: 1243-4463 Capsella grandiflora
Cagra.10840s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold10840: 1243-3242 Capsella grandiflora
Cagra.10840s0002 5.0kb upstream 5.0kb upstream 6221 true Scaffold10840: 3243-9463 Capsella grandiflora
Cagra.10840s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold10840: 4464-9463 Capsella grandiflora
Cagra.10840s0002 5.0kb downstream 5.0kb downstream 4463 true Scaffold10840: 1-4463 Capsella grandiflora
Cagra.10840s0002 5.0kb downstream 5.0kb downstream 3242 false Scaffold10840: 1-3242 Capsella grandiflora
Cagra.10840s0002 10.0kb upstream 10.0kb upstream 11221 true Scaffold10840: 3243-14463 Capsella grandiflora
Cagra.10840s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold10840: 4464-14463 Capsella grandiflora
Cagra.10840s0002 10.0kb downstream 10.0kb downstream 4463 true Scaffold10840: 1-4463 Capsella grandiflora
Cagra.10840s0002 10.0kb downstream 10.0kb downstream 3242 false Scaffold10840: 1-3242 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368558 5261 Brassicaceae View MSA
123838468 5264 Brassicales-Malvales View MSA
124343917 5266 SBM View MSA
124244309 5268 Malvidae View MSA
124064994 5270 Rosid View MSA
123741194 5271 Pentapetalae View MSA
122787940 5272 Eudicot View MSA
122042247 5273 Angiosperm View MSA
121309941 5274 Embryophyte View MSA
123347568 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain