Gene : Cagra.11598s0002 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2
Name:  ? Cagra.11598s0002 Secondary Identifier:  ? PAC:28911158
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11598s0002 0.5kb upstream 0.5kb upstream 3338 true Scaffold11598: 15986-19323 Capsella grandiflora
Cagra.11598s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold11598: 15986-16485 Capsella grandiflora
Cagra.11598s0002 0.5kb downstream 0.5kb downstream 3338 true Scaffold11598: 16486-19823 Capsella grandiflora
Cagra.11598s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold11598: 19324-19823 Capsella grandiflora
Cagra.11598s0002 1.0kb upstream 1.0kb upstream 3838 true Scaffold11598: 15486-19323 Capsella grandiflora
Cagra.11598s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold11598: 15486-16485 Capsella grandiflora
Cagra.11598s0002 1.0kb downstream 1.0kb downstream 3838 true Scaffold11598: 16486-20323 Capsella grandiflora
Cagra.11598s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold11598: 19324-20323 Capsella grandiflora
Cagra.11598s0002 2.0kb upstream 2.0kb upstream 4838 true Scaffold11598: 14486-19323 Capsella grandiflora
Cagra.11598s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold11598: 14486-16485 Capsella grandiflora
Cagra.11598s0002 2.0kb downstream 2.0kb downstream 4838 true Scaffold11598: 16486-21323 Capsella grandiflora
Cagra.11598s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold11598: 19324-21323 Capsella grandiflora
Cagra.11598s0002 5.0kb upstream 5.0kb upstream 7838 true Scaffold11598: 11486-19323 Capsella grandiflora
Cagra.11598s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold11598: 11486-16485 Capsella grandiflora
Cagra.11598s0002 5.0kb downstream 5.0kb downstream 7838 true Scaffold11598: 16486-24323 Capsella grandiflora
Cagra.11598s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold11598: 19324-24323 Capsella grandiflora
Cagra.11598s0002 10.0kb upstream 10.0kb upstream 12838 true Scaffold11598: 6486-19323 Capsella grandiflora
Cagra.11598s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold11598: 6486-16485 Capsella grandiflora
Cagra.11598s0002 10.0kb downstream 10.0kb downstream 12838 true Scaffold11598: 16486-29323 Capsella grandiflora
Cagra.11598s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold11598: 19324-29323 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028448 5273 Angiosperm View MSA
122369045 5261 Brassicaceae View MSA
123832308 5264 Brassicales-Malvales View MSA
124340112 5266 SBM View MSA
124180896 5268 Malvidae View MSA
124066281 5270 Rosid View MSA
123744729 5271 Pentapetalae View MSA
122794766 5272 Eudicot View MSA
121297938 5274 Embryophyte View MSA
123335948 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain