Gene : Cagra.12076s0015 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  15
Name:  ? Cagra.12076s0015 Secondary Identifier:  ? PAC:28907624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12076s0015 0.5kb upstream 0.5kb upstream 1636 true Scaffold12076: 41077-42712 Capsella grandiflora
Cagra.12076s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold12076: 41077-41576 Capsella grandiflora
Cagra.12076s0015 0.5kb downstream 0.5kb downstream 1148 true Scaffold12076: 41577-42724 Capsella grandiflora
Cagra.12076s0015 0.5kb downstream 0.5kb downstream 12 false Scaffold12076: 42713-42724 Capsella grandiflora
Cagra.12076s0015 1.0kb upstream 1.0kb upstream 2136 true Scaffold12076: 40577-42712 Capsella grandiflora
Cagra.12076s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold12076: 40577-41576 Capsella grandiflora
Cagra.12076s0015 1.0kb downstream 1.0kb downstream 1148 true Scaffold12076: 41577-42724 Capsella grandiflora
Cagra.12076s0015 1.0kb downstream 1.0kb downstream 12 false Scaffold12076: 42713-42724 Capsella grandiflora
Cagra.12076s0015 2.0kb upstream 2.0kb upstream 3136 true Scaffold12076: 39577-42712 Capsella grandiflora
Cagra.12076s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold12076: 39577-41576 Capsella grandiflora
Cagra.12076s0015 2.0kb downstream 2.0kb downstream 1148 true Scaffold12076: 41577-42724 Capsella grandiflora
Cagra.12076s0015 2.0kb downstream 2.0kb downstream 12 false Scaffold12076: 42713-42724 Capsella grandiflora
Cagra.12076s0015 5.0kb upstream 5.0kb upstream 6136 true Scaffold12076: 36577-42712 Capsella grandiflora
Cagra.12076s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold12076: 36577-41576 Capsella grandiflora
Cagra.12076s0015 5.0kb downstream 5.0kb downstream 1148 true Scaffold12076: 41577-42724 Capsella grandiflora
Cagra.12076s0015 5.0kb downstream 5.0kb downstream 12 false Scaffold12076: 42713-42724 Capsella grandiflora
Cagra.12076s0015 10.0kb upstream 10.0kb upstream 11136 true Scaffold12076: 31577-42712 Capsella grandiflora
Cagra.12076s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold12076: 31577-41576 Capsella grandiflora
Cagra.12076s0015 10.0kb downstream 10.0kb downstream 1148 true Scaffold12076: 41577-42724 Capsella grandiflora
Cagra.12076s0015 10.0kb downstream 10.0kb downstream 12 false Scaffold12076: 42713-42724 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361564 5261 Brassicaceae View MSA
123798202 5264 Brassicales-Malvales View MSA
124295873 5266 SBM View MSA
124250198 5268 Malvidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain